| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3356 |
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| Symbol | |
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| ID | 8134336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3783766 |
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| End bp | 3784530 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866657 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003018908 |
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| Protein GI | 253689718 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGGGAT TTCGTTGGGA GATCATTCAG GAGTATGCCC CGCTATTTAT GGAAGGCACC
TGGATGACCA TCAAATGCAC CATTATCTGT GTCATTCTTG GCACCTGTTG GGGATTAACG
CTCGGGTTAG GCCGCTTAGC GCAAGCACCG CACGGGCCGT GGAAATATAT CCTGCACTAT
GGCGTTCAGT GGCCGGTGCG TATCTACATT AGCGCCTTTC GCGGTACGCC GCTGTTTGTA
CAAATCATGG TGGTGCACTT CGCGCTGGTG CCGCTATTCA TCAACCCGCG TGACGGGTTG
CTGGTAACCA GCAATATTAT GTCGGTCGAT GTTGCCCGCA CGCTACGCGC AGATTACGGC
GCGTTCCTCT CCTGCATTGT GGCCATTACG CTGAATGCGG GCGCCTATGT CTCTGAAATA
TTCCGCGCCG GTATTCAGTC AATCGATCGC GGCCAGATGG AAGCATCTCG CTCGCTCGGC
ATGAGCTATG GCCGCACCAT GCGGAAAGTC ATCCTGCCAC AGGCTTTTCG CCGTATGCTG
CCGCCGTTGG GTAACAACGC CATCGCGATT GTGAAAGATT CCTCGCTGGC TTCGGCGATC
GGATTGGCGG ATCTCGCCTA TGCCGCTCGC ACGGTATCAG GGGCTTACGC CACGTACTGG
GAACCCTATC TGGCGATCTC TATCGTCTAT TGGGTTATTA CTTTCCTGCT CTCGCTGCTG
GTGCGGCACA TGGAAACGAG GTTTGGCAAA AGTGATTCAC GTTAA
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| Protein sequence | MTGFRWEIIQ EYAPLFMEGT WMTIKCTIIC VILGTCWGLT LGLGRLAQAP HGPWKYILHY
GVQWPVRIYI SAFRGTPLFV QIMVVHFALV PLFINPRDGL LVTSNIMSVD VARTLRADYG
AFLSCIVAIT LNAGAYVSEI FRAGIQSIDR GQMEASRSLG MSYGRTMRKV ILPQAFRRML
PPLGNNAIAI VKDSSLASAI GLADLAYAAR TVSGAYATYW EPYLAISIVY WVITFLLSLL
VRHMETRFGK SDSR
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