Gene PC1_3336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3336 
Symbol 
ID8134309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3757144 
End bp3757893 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content56% 
IMG OID644866630 
ProductDTW domain containing protein 
Protein accessionYP_003018888 
Protein GI253689698 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAACC ATCCTTTAAT GGTCAACCGT CCTCTCAGGG ACAATGCCGT ACTCCGCCTG 
CGTCAACAGC GCCTTGAACA GTCAACCAAG CCGTTCCGCG CCCGTGGCTG TCGCGTAATA
CGCTGCCAGC AGTGTTTGTT GCCCGCGACC AACTGTCTGT GCCATACCAT TCAGGCGCAG
CAATCCCGCA GCCGCTTCTG TCTGGTGATG TTTGATACCG AACCGCTAAA ACCGAGCAAT
ACCGGACGTC TCATTGCCGA TATCCTTCCT GAGACGCAGG CATTTCTCTG GTCACGCACA
GAGCCCGACT CTCAGTTGCT TGCGGCTCTG CAAGATCCTG ATGTTCAGCC CTATCTGGTT
TTCCTTGCCG ATGCGGCAGA AGAAGGACGT CAGGTATTTC AGCAGTTCCC CGCAACGGAA
AAGCCCGCCC TGTTTGTCTT GCTTGATGGC ACTTGGCCGG AAGCACGTAA GATGTTCCGC
AAAAGCCCCT ATCTGGACAA TCTGCCGATC CTGTCGCTGG ATGTAGAGGC ACTTTCCCGC
TATCAGTTGC GTGAAGCCAG TAGCGCTGGA CAACACTGCA CCGCCGAGAT TGCCATTGCT
CTACTCGCTC AGGCAGGCGA TACGGTCGCG GCTGACGCGC TATCGCAGCA TTTCGACCGT
TTTCGACGAC ACTATCTGGC AGGGAAATCA CACCACAGCG TGCGGGAAAG TTTACCCATC
GTCACAGCAC AACCGGTGGA AAGCGTTTAG
 
Protein sequence
MINHPLMVNR PLRDNAVLRL RQQRLEQSTK PFRARGCRVI RCQQCLLPAT NCLCHTIQAQ 
QSRSRFCLVM FDTEPLKPSN TGRLIADILP ETQAFLWSRT EPDSQLLAAL QDPDVQPYLV
FLADAAEEGR QVFQQFPATE KPALFVLLDG TWPEARKMFR KSPYLDNLPI LSLDVEALSR
YQLREASSAG QHCTAEIAIA LLAQAGDTVA ADALSQHFDR FRRHYLAGKS HHSVRESLPI
VTAQPVESV