Gene PC1_3335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3335 
Symbol 
ID8134308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3756578 
End bp3756997 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content54% 
IMG OID644866629 
Productthioredoxin 2 
Protein accessionYP_003018887 
Protein GI253689697 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACGG TATGTGGATC TTGCCAAACA ACCAATCGCC TGCCAGAAGC GCGTATTGAT 
GACCATGCAA AATGTGGTCG CTGCGGAGAA ACCTTATTCA GCGGTGACGT CATCAATGCC
ACAGAAGCGA CGCTCGATAA ACTGTTGCAG GACGATCTTC CGGTCGTGGT CGATTTCTGG
GCGCCCTGGT GCGGCCCTTG TGTCAACTTC GCCCCCGTGT TTGAAAACGT CGCGCAGGAG
CGTAATGGGA AAATCCGCTT TATTAAGGTC AACACCGAAG CCGAACCGGC ACTCAGCGCA
CGTTTCCGCA TCCGCAGCAT CCCAACCCTC ATGATCTTCA AACAGGGCCA GATGGTCGAT
ATCCTCAATG GCGCGTTGCC AAAAGCACAG TTTGAGGACT GGCTGGACGA ATCGCTGTAG
 
Protein sequence
MNTVCGSCQT TNRLPEARID DHAKCGRCGE TLFSGDVINA TEATLDKLLQ DDLPVVVDFW 
APWCGPCVNF APVFENVAQE RNGKIRFIKV NTEAEPALSA RFRIRSIPTL MIFKQGQMVD
ILNGALPKAQ FEDWLDESL