| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3334 |
|---|
| Symbol | |
|---|
| ID | 8134307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 3755180 |
|---|
| End bp | 3756328 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644866628 |
|---|
| Product | putative methyltransferase |
|---|
| Protein accession | YP_003018886 |
|---|
| Protein GI | 253689696 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATT CATTCAATAG TAAAAGCGGC AAAGTCCGTG TGATGTACGT CCGCAGTGAT
GATGAGGGCG AGAAAGAGAA TAAAAACAAG CGCCCTGCTG ACAAAGATCG CCGTGGCGAT
CGACGTGATG GCGGTGGTTC ACGGGATCAG CGTGAAAAGC CGAAGCATCC GCGCGACGTT
AACCCGCGTT ATGCCCGGGA AAATCCGTCC CGCGACGGCG ATAGCAATAA AACGCCGTGG
GGCAATAAAG ATCGTAACGA ACGCAGCGGC GATCGTCCTC GCCGCCCGCG CGGTGAAGAG
ACGGGCGGTT ATGAATCCCC GTGGAAAACC GTGTCTCGTG CGCCGGGCGA CAGTGAAACG
CCGGATCACG GCGGAATTAC AGGCAAAAGC CAGATCGATC CTGAGCAACT GCGTCGCCAG
CGTCAGGAAG AAACACGTGT TTACGGTGAA AATGCCTGTC AGGCGCTGTT TAAAAATCGC
TCTGAGGTGA TTGTTCGTGC CTGGTTCCTG CAGGAAGTGA CGCCGCGTTT CCGCGATGCA
CTGCGCTGGA TGGCGGCAAA CCGCAAGGCT TACCACGTTG TGGAAGAGGA AGAGCTGATC
AAGGCTTCCG GTACTGAACA CCACGGTGGC GTCTGCTTTC TGATTAAGAA GCGTCAGGGA
CTGGATGTGC GTGAGTACCT GAAAACGGCT GACGAGCACG ACTGTGTGCT GGCGCTGGAA
GATGTGGGTA ACCCGCACAA CCTCGGCGGC ATTATGCGCA GCTGCGCGCA TTTCGGCGTG
AAAGGTATTC TGGTGCAGGA TGCGGCGCTG CTGGAATCTG GCGCGGCCGT GCGTACGGCG
GAAGGCGGTG CGGAACACGT TAAAGCGATT AACGCTGACG ATTTCCTGTC TGTGCTGGCG
GAATTCCGCC GTGCTGGCTA CACCATCGTG ACCACGTCCA GCCATAAAGG TACTGCCTTA
TCGCAAGCTA CGCTTCCGGC GAAAACCGTG ATTGTGTTGG GTCAGGAAGG GGATGGCCTG
TCAGATAGCG CCTGGCAACA GGGTGATGTA AAAGTCTCTA TCGGCGGTAC TGGTAAGGTT
GAAAGTCTGA ATATTTCGGT CGCAACGGGC ATTTTGCTGT CCGAGTGGTG GCGACAGAAC
CAGGCCTGA
|
|---|
| Protein sequence | MSDSFNSKSG KVRVMYVRSD DEGEKENKNK RPADKDRRGD RRDGGGSRDQ REKPKHPRDV
NPRYARENPS RDGDSNKTPW GNKDRNERSG DRPRRPRGEE TGGYESPWKT VSRAPGDSET
PDHGGITGKS QIDPEQLRRQ RQEETRVYGE NACQALFKNR SEVIVRAWFL QEVTPRFRDA
LRWMAANRKA YHVVEEEELI KASGTEHHGG VCFLIKKRQG LDVREYLKTA DEHDCVLALE
DVGNPHNLGG IMRSCAHFGV KGILVQDAAL LESGAAVRTA EGGAEHVKAI NADDFLSVLA
EFRRAGYTIV TTSSHKGTAL SQATLPAKTV IVLGQEGDGL SDSAWQQGDV KVSIGGTGKV
ESLNISVATG ILLSEWWRQN QA
|
|---|
| |