Gene PC1_3333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3333 
Symbol 
ID8134306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3754672 
End bp3755112 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content56% 
IMG OID644866627 
Productputative lipoprotein 
Protein accessionYP_003018885 
Protein GI253689695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.919209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAGA AAGTTATCGC GGTATCGTTG CTGTTGGGCG CACTACTGGC AAGCGGTTGC 
AGTTCGCTAC CGCGCTCATC CACTGCTGTT GCCGCTGCAC CGGCTGCTGA GGCGTGTCAG 
ATTGGCGATA AGCAGGTACA GACCACGCTT TATTTTGGTT TGAATCGTCC TGCTGGCCCG 
GTGATTTCCG AGGCTGAGTG GAAAGCGTTT CTGGACGGCG AGGTAACGCC ACGCTTTAAA 
GAAGGGCTCA CGGTGTTCGA TGCCAAAGGA CAATGGTTGG GGAACGATGG TGTGGTTGCT 
CGGGAGAACA GCAAGGCGCT GATGTTGATT CATGGCGCTG ATAAAGAGCA CGATATTGAA 
GCGCTCCGCA CCACCTACAA AGCACGTTTC GCGCAGGAGT CCGTCATGCG GATTGATGCG 
CCCGTCTGCG TCGCATTCTG A
 
Protein sequence
MKQKVIAVSL LLGALLASGC SSLPRSSTAV AAAPAAEACQ IGDKQVQTTL YFGLNRPAGP 
VISEAEWKAF LDGEVTPRFK EGLTVFDAKG QWLGNDGVVA RENSKALMLI HGADKEHDIE 
ALRTTYKARF AQESVMRIDA PVCVAF