| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3330 |
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| Symbol | |
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| ID | 8134303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3750367 |
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| End bp | 3751542 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644866624 |
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| Product | efflux pump membrane protein |
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| Protein accession | YP_003018882 |
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| Protein GI | 253689692 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA GTGTGGAAAA TCAGGTGCCG CAGACGCCCA AAAGAAACAA GAAACAGCAG
CGTAAGCGTG TGTTATCGCT GTTGACGTTT ATTTTCGTCG TGCTGGGTTG CGCCTGGCTG
GTTTACTGGT TCCTGGTACT CAGACACCAC CAAAGCACTG ACGATGCCTA CGTCGCAGGT
AATCAGATTC AGATCATGGC GCAAGTCAGC GGTAGCGTCA CCCATGTTAA CGTCGACAAT
ACCGATTTTG TTAAGCAGGG ACAGGTTCTG GTGGAACTGG ATCCTACCGA TGCGGAGCAG
GCGCTTGAAC GCGCGAAAAC CGGGCTGGCC AACAGCGTAC GCCAAACGCA TCAGCTGATT
ATTAACAGCA AGCAATATCA GGCGAATATT GAACTGCGCC AAACCGAGTT GAACAAAGCG
CAAAGCGACT TGAGCCGCCG GGAAGCGCTG GGCAGTGCCA ATGCCATCGG GCGTGAAGAA
GTGCAGCATG CTCGCGATGC CGTCGCGACC GCCAAAGCCG CGCTGGAAGT CGCCAGACAA
CAATATCAGG CGAATCAGGC GATGATTCTG GATACCCCGC TTGAGAAACA GCCAGCCATA
CAACAAGCTT CTGTAGAAAT GCGTGACGCC TGGCTGGCGT TACAACGCAC AAAAATCGTC
AGCCCGATCG ACGGTTATGT CTCACGCCGC AGCGTGCAGA TTGGCGCGCG TATCTCTTCA
ACGTCAGCGC TGATGGCCGT CGTTCCCGCG AATCATCTGT GGGTCGATGC TAACTTCAAA
GAGACGCAGT TAGCCAATAT GCGTATCGGC CAACCGGCTA CCGTCGTCGC GGATATCTAC
GGTGATGATG TAGTGTATCA GGGAAAAGTG GTCGGCCTCG ATATGGGAAC CGGTAGCGCG
TTCTCTCTGC TGCCCGCCCA GAACGCGACT GGCAACTGGA TTAAGGTTGT TCAACGCCTG
CCCGTCCGTA TTGAACTCGA TCCACAGCAG GTTGCCGAGC ATCCACTGCG TATCGGCCTG
TCCGCATTGG TTAATGTCGA TACCGCCAAT GCCGAAGGCA GTGCGCTAGC GGAAACCTCA
CGCACCACGC CAGCCTACCA AAGTGATGCA TTGACGCTGG ATCTCACCCC TGTTAACCAG
GAAATCAGCG CCATTATTCA GGCGAACGCC GGTTAA
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| Protein sequence | MSESVENQVP QTPKRNKKQQ RKRVLSLLTF IFVVLGCAWL VYWFLVLRHH QSTDDAYVAG
NQIQIMAQVS GSVTHVNVDN TDFVKQGQVL VELDPTDAEQ ALERAKTGLA NSVRQTHQLI
INSKQYQANI ELRQTELNKA QSDLSRREAL GSANAIGREE VQHARDAVAT AKAALEVARQ
QYQANQAMIL DTPLEKQPAI QQASVEMRDA WLALQRTKIV SPIDGYVSRR SVQIGARISS
TSALMAVVPA NHLWVDANFK ETQLANMRIG QPATVVADIY GDDVVYQGKV VGLDMGTGSA
FSLLPAQNAT GNWIKVVQRL PVRIELDPQQ VAEHPLRIGL SALVNVDTAN AEGSALAETS
RTTPAYQSDA LTLDLTPVNQ EISAIIQANA G
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