| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3326 |
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| Symbol | |
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| ID | 8134299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3746897 |
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| End bp | 3748117 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644866620 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003018878 |
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| Protein GI | 253689688 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCTTC CGCAACACGC TGTATCACCC CAGCCGCAAC CGGGGCTCAG TCTATCTTTG
ACCCTGATTA TGTCTGTCGC GACCGGCCTC GCCGTCGCCA GTAACTATTA TGCTCAGCCG
CTGCTGGAAA CCATTGCCAG AGTCTTTGAG CTTTCCGTCA ATCAGGCAGG GTTCATTGTC
ACCGCTGCAC AGTTGGGTTA CGCCGTCGGC CTGCTGTTTT TGGTTCCGCT GGGGGACATG
TTTGAACGCC GAACGCTGAT CGTCGGCATG ACGTTGCTCG CCGCTGGCGG GATGTTACTC
ACCGCTTCTG CACCCACGCT CTGGATAATG ATTACCGGCA CGGCGTTAAC TGGCCTGTTC
TCCGTCGTCG CCCAGTTGCT GGTGCCTCTT GCCGCGACGC TGGCGACGCC GGAAACGCGC
GGTAAAGTGG TCGGCACGAT TATGAGTGGT CTGCTGCTGG GGATTCTGCT GGCGCGAACC
GTCGCGGGTG CGCTGGCTTC ACTCGGCGAC TGGCGCACCG TGTACTGGGT TGCCAGCACC
TTGATGGTCA TCATGGCGCT GATTCTGTGG CGGGCATTGC CGCGTATTCC ACAGCAAAAT
ACGCTGAACT ACCCACAGTT GCTGATCTCA ATTTTCCGTC TGTTCTCTGC CAGCCCACTG
CTGCGCACGC GCGCTATTCT GGGCTGTCTG TCCTTTGCCA ATTTCAGCAT TCTGTGGACG
TCGATGGCAT TCCTGCTGGC TTCACCGCCC TACGGTTACT CCGAAGGCGT TATCGGCCTG
TTCGGGCTGG TTGGCGCAGC GGGCGCACTA GCGGCCTCGC GCGCCGGGCG TCTGGTCGAT
CAGGGTAAAG CCAAGCCGAC CACCAGCGTG GGGATTGTCC TGCTTTTGCT CTCGTGGGGC
TTTATCGCGC TCGGTATTCA TTCCGTGGCG GCGCTGCTCA TTGGCATCAT CGTGCTGGAT
CTGGCGGTTC AGGGCGTGCA CGTGACCAAC CAAAGCGTAA TCTACCGAAT GATGCCCGAA
GCACGTAACC GCCTGACAGC AGGCTACATG ACCAGCTACT TCATCGGCGG CGCACTGGGC
TCACTTCTCT CTGCCTCGGC TTACCAGCAA TGGGGCTGGC TGGGCGTCTG TGCCGCAGGC
GGCATTATCA GCCTGTTGAA CCTGCTGGTG TGGTGGCGCA GCCATCATCA TGAGACGCAG
GAAGCCATGG CGGCACTGTA G
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| Protein sequence | MSLPQHAVSP QPQPGLSLSL TLIMSVATGL AVASNYYAQP LLETIARVFE LSVNQAGFIV
TAAQLGYAVG LLFLVPLGDM FERRTLIVGM TLLAAGGMLL TASAPTLWIM ITGTALTGLF
SVVAQLLVPL AATLATPETR GKVVGTIMSG LLLGILLART VAGALASLGD WRTVYWVAST
LMVIMALILW RALPRIPQQN TLNYPQLLIS IFRLFSASPL LRTRAILGCL SFANFSILWT
SMAFLLASPP YGYSEGVIGL FGLVGAAGAL AASRAGRLVD QGKAKPTTSV GIVLLLLSWG
FIALGIHSVA ALLIGIIVLD LAVQGVHVTN QSVIYRMMPE ARNRLTAGYM TSYFIGGALG
SLLSASAYQQ WGWLGVCAAG GIISLLNLLV WWRSHHHETQ EAMAAL
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