| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3321 |
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| Symbol | |
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| ID | 8134294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3741266 |
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| End bp | 3742534 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644866615 |
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| Product | glycine betaine transporter membrane protein |
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| Protein accession | YP_003018873 |
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| Protein GI | 253689683 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAAAT CAACATCAAG CCCGTGGGAC AACACCACGG CACAATCTCA CACGGCAGAC
CAGAGCGCAG CGCCTGAACA GGCTAATGGC GCGCAGCAGA ACGATCCGTG GGCAACCAGC
ACACAGAACG CGCCTGCCGA TTCAGCTCCA GCCCAACACA GCGCGACGCC AGACAGCGCA
GCGCAGAGCG ATCCCTGGTC CACCGGCGCG CCCGCGCAGG ATGCGCCCAC TAACGGCAGT
GATGCCTGGA GCAGCACGCC AGCTCCCGAT GGTTCCGCCG ATGCAGCCCA TCAGGCGGCG
CAATCCGGCA GTGACTGGTT AAACAGTGCG GCTCCTGCGA CACCTGAGCA TTTCAACTTG
CTCGATCCGT TTAAAGACAC GCTGATCCCA CTGGACAGCT GGGTTACTCA CGGTATCGAC
TGGGTTGTGC TGCACTTCAG ACCAGTTTTT CAGGGCGTTC GTGTCCCGGT CGATTTTATT
CTGAGCGGCT TCCAGCAGTT TCTTCTGGGG ATGCCGGCGC CAATTGCCAT TCTGGTGTTT
TCACTGCTTG CCTGGCAGAT GTCCAGCCTC GGTATGGGTG TCGCCACCCT GCTGTCACTG
ATCGCTATCG GTGCAATTGG TGCCTGGTCA CAGGCGATGA TCACGCTGGC GTTGGTTCTT
ACGGCGCTGT TCTTCTGCGT ACTCATCGGG CTCCCCATGG GGATCTGGCT GGCGCGTAGC
GAACGGGCGG CGAAGTTCAT CCGGCCGCTA TTGGATGCCA TGCAGACCAC GCCTGCGTTT
GTCTATCTGG TGCCTATCGT CATGCTGTTC GGTATCGGTA ACGTGCCGGG CGTCGTGGTG
ACCATCATCT TTGCCCTGCC GCCGATTATT CGCTTAACGA TTCTGGGTAT TCGTCAGGTG
CCGGCCGATT TGATTGAAGC CGCAGAGTCA TTCGGCGCCA GCCCGCGCCA GATGCTGTTT
AAGGTTCAGC TCCCGCTGGC CATGCCGACC ATCATGGCCG GTGTTAACCA GACGCTGATG
CTGGCGCTGT CGATGGTGGT TATCGCCTCG ATGATCGCCG TGGGCGGTCT GGGTCAGATG
GTACTGCGCG GTATTGGTCG TCTGGATATG GGTCTGGCTG CCGTCGGCGG CGTCGGGATT
GTTATTCTGG CTATTATTCT TGACCGCCTG ACTCAATCTC TGGGACGCGA TCGCCGCAGC
AAAGGCAACA AGAGCTGGTA CGCCAGCGGC CCGATTGGCC TGCTGACCCG TCCTTTCATC
AAGCAGTAA
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| Protein sequence | MSKSTSSPWD NTTAQSHTAD QSAAPEQANG AQQNDPWATS TQNAPADSAP AQHSATPDSA
AQSDPWSTGA PAQDAPTNGS DAWSSTPAPD GSADAAHQAA QSGSDWLNSA APATPEHFNL
LDPFKDTLIP LDSWVTHGID WVVLHFRPVF QGVRVPVDFI LSGFQQFLLG MPAPIAILVF
SLLAWQMSSL GMGVATLLSL IAIGAIGAWS QAMITLALVL TALFFCVLIG LPMGIWLARS
ERAAKFIRPL LDAMQTTPAF VYLVPIVMLF GIGNVPGVVV TIIFALPPII RLTILGIRQV
PADLIEAAES FGASPRQMLF KVQLPLAMPT IMAGVNQTLM LALSMVVIAS MIAVGGLGQM
VLRGIGRLDM GLAAVGGVGI VILAIILDRL TQSLGRDRRS KGNKSWYASG PIGLLTRPFI
KQ
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