| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3312 |
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| Symbol | |
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| ID | 8134285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3732219 |
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| End bp | 3732884 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644866606 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003018864 |
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| Protein GI | 253689674 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCTATC AGCTTAATTT TTCCGCGCTG TTGCCGTTCT GGCCTGAGCT GCTGGCGGGG
TTGTGGGTCA CCATTGAGCT GACGGTAATG GCCACTCTCG GCGGTATTGC CATCGGTATC
TGTGGGGCGG CCTTGCGCAG CGGCAAGCCC ACTCTGCTGA GTCGGCTGTG GGGAATCTAC
GTCGAGCTGA TCCGCAATAC GCCGTTTGTG GTTCAGCTGT TCTTCATCGT TTTCGGTTTG
CCGAGTCTGG GCTGGAAACT CACCGCTGGG CAGGCCGCGC TGTTGGCGAT GCTGATTAAT
CTGGGAGCGT ACAGCACCGA GATCATCCGC GCGGGGATTC AGGTGACGCC GAAAGGCCAG
TGGGAAGCCG CCCGCGTGCT GGGGCTGACG CGTGTGCAGA CCTTTTTGCG TGTGATTCTG
CCGCCCGCAC TCCAGCGGAT TTATCCGGCG CTGGTTAGCC AGTGCATCAT CGTCATGCTG
GGGTCGTCGG TGGTGTCGCA GGTGTCTTAT GAAGAACTGA CCTTTGCCGC CAACCTGATC
CAGTCCCGTA CGTTTCTGAG TTTTGAGGTG TATCTGGCGA CCACGCTGTG TTATCTGGCG
CTGTCTGTCC TGATGCGGCA ACTCTTACTG TTGGCAGGGC GGCGTTTTTT TAGGAGTCAG
CCATGA
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| Protein sequence | MTYQLNFSAL LPFWPELLAG LWVTIELTVM ATLGGIAIGI CGAALRSGKP TLLSRLWGIY
VELIRNTPFV VQLFFIVFGL PSLGWKLTAG QAALLAMLIN LGAYSTEIIR AGIQVTPKGQ
WEAARVLGLT RVQTFLRVIL PPALQRIYPA LVSQCIIVML GSSVVSQVSY EELTFAANLI
QSRTFLSFEV YLATTLCYLA LSVLMRQLLL LAGRRFFRSQ P
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