| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3311 |
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| Symbol | |
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| ID | 8134284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3731566 |
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| End bp | 3732222 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866605 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003018863 |
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| Protein GI | 253689673 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCAT TTACCGACTG GGATATTGTG CGCAACCTGC TGCTGGCGGC ACGCTGGACG
CTGCTGTTGT CGCTGACGGC CTTCATTGGC GGTGCGCTGG TGACGTTTCC ACTGATGCTG
CTGCGGTTGA CCAAACGCAA ATGGCCGACA CGTTTTGTCC ATCTGTATTC CGAGCTGTTT
CAGGGGACGC CACTGCTGAT GCAGCTGTTT CTCGCGTTTT TCGGGCTGGC GCTGTTCGGC
ATCGATGTGA GCCCGTGGAC GGCGGCGGCA CTGGCGCTGA CGCTGTTTAC CAGCGCTTTT
CTGGTGGATA TCTGGTGCGG CAGCGTGGAA GCCTTGCCGA AAGGGCAGTG GGAAGCCTCA
CGCTGTCTCG GTCTGGATTT CGGCCAGACG CTCTATCGGG TCATTGCGCC ACAGGCGATG
CGTATCGCCA TCGCGCCCAC GGTGGGGTTT TCCGTCCAGG TCATTAAAGG CACCGCGCTG
GCGTCAATCA TCGGATTTGT CGAGCTGACC AAAGCGGGAA CCATGTTGAA TAACGTGACC
TATCAGCCGT TTAAAGTGTT CGGATTGGTG GCGCTGGGCT ACTTCCTGAT GTGCTATCCG
CTCTCTTACT ACAGCCGCTA TCTGGAGAAG AAATTCAATG CCGCTCATCA CCATTAA
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| Protein sequence | MMAFTDWDIV RNLLLAARWT LLLSLTAFIG GALVTFPLML LRLTKRKWPT RFVHLYSELF
QGTPLLMQLF LAFFGLALFG IDVSPWTAAA LALTLFTSAF LVDIWCGSVE ALPKGQWEAS
RCLGLDFGQT LYRVIAPQAM RIAIAPTVGF SVQVIKGTAL ASIIGFVELT KAGTMLNNVT
YQPFKVFGLV ALGYFLMCYP LSYYSRYLEK KFNAAHHH
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