| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3307 |
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| Symbol | |
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| ID | 8134280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3726045 |
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| End bp | 3728024 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644866601 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003018859 |
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| Protein GI | 253689669 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAA ACAGACTGCA TTTTGTATTA TCTTTAGCCG CACCATTATT TTCCTCTGTA
CCTTTATTTT TTTCTCCGAT TGCTTCTGCA ATATCACAAG CAGAATTAGG GTATCGCGAT
GTGCCAACCA TTATGCTGGA TGGTCTGACA TTTAAAGACC TGAACCGTGA TGGAAAGGTC
AATCCATATG AAGACTGGCG TTTATCTCCC GATCAACGAG CGAACGATCT GGTTACGCGT
ATGACGCTGG CGGAAAAAGC GGGGTTGATG ATGCATGGTT CCGCCCCGAC GACGGGGAGT
GTGATTGGCG CAGGGTCTGC TTATGATATT GATACGGCGA GAAAAATGAT TGCTGAGCGG
TCAATCAGCA GTTTTATCAC TCGCCTGTCC GGTGACGATC CTACGCAAAT GGCGGAGGAA
AATAATAAAT TACAGCAGAT TGCAGAAAAT ACGCGCTTGG GGATTCCGCT GACGATTAGC
AGTGACCCGC GCAATGCGTT CCAGTATTTG GTTGGCGCAT CCGTTTCCTC TGGAAAGTTT
AGTAAATGGC CAGAAACGCT GGGGCTGGCC GCCATTGGTG ATGAATCACT GACCCGGCAG
TTTGCCGATA TTGTGCGTCA GGAATATCGT GCAGTCGGGA TCACGGAAGC GCTATCACCG
CAGGCCGATC TGGCAACGGA ACCGCGTTGG TCAAGGAGTA GTGGAACGTT TGGTGAAGAT
GCGGAACTGA CCAAGAAAAT GGTCAGGGGT TATATCGAAG GCATGCAAAA TGGCAGAAAC
GGCCTGAATC CACAAAGTGT CATCAGTATC GTTAAACACT GGGTCGGATA TGGCGCTGCG
CAGGATGGGT GGGATAGCCA CAATGTTTAT GGCAAATATG CCATCTTCAA AAAGAACGAT
CTCCAGCAGC ATATCGAGCC TTTTACCGGA GCATTTGAGG CGCGTGTCGC AGGCATTATG
CCAACCTACT CCATTTTGAA AGACGCGACG TGGCAAGGAA AGCCGATTGA GCAAGTCGGC
GCGGGCTTTA ACCGTTTTCT ATTAACCGAT TTGCTACGTG GGGTTTACGG ATTTGATGGC
GTCATTCTTA GCGACTGGCT TATCACCAAT GATTGTAAAG ATGACTGTGT TACGGGGGCT
AAGCCGAATG AAAAGCCCGT ACCGCGTGGC ATGCCGTGGG GCGTTGAAAA CCTGACGGTA
GAACAGCGAT TCATTAAAGC GGTAGAGGCG GGTGTCGATC AGTTTGGTGG TGTCACTAAC
TCTTCGGTAC TGATTAGCGC GGTACAGCGT GGAAAACTGG CTGAGTCGCG TCTGGATGTT
TCTGCCAGGC GTTTACTGAA ACAGAAATTC CAGGTTGGCT TGTTTGAACG TCCTTATGTT
CATGCAGAAC AGGCAAGCCA GGTGGTGGGT AAGGCAGAAT GGCAGCAGCA GGCGGATAAG
GCGCAGAGAC GCGCGTTGGT ACTGCTGCAA AATAAAAATA TCTTGCCATT GCGCGCAGGA
AGCAAAGTCT GGCTGGATGG AATCGATAAG AGCGTTGCTC AAAAGGCTGG GCTGATCGTG
GTAGAAACGC CAGAACTCGC CGATGTCGCT GTGGTTCGCA GCGTTGCACC GTATGAGCAA
CCGCATAAAA ATTTCTACTT TGGTGCCAAA CACCACGAAG GTTCACTGGC CTATACCGAA
AACAATCCAG AATACCAAAC GATTGTCAGG GCCAGTACCA GCGTGCCGAC AATCGTGACG
GTGTATCTGG ATCGTCCGGC TATTCTGACC AATATCGTGG ATAAAGCCCA GGCTGTTATC
GCCAACTTTG GGATCAGTGA CGATGTGTTA CTCAAGCAAC TTATGTCTGG AGAGGCATAT
ACCGGGAAAC TCCCATTTGA GTTACCGTCT TCCATGAAAG CGGTACTCAA TCAGCAACCC
GGTGTACCCT ATGACAGTAA AAAACCGCTC TTTCCCTTTG GATTCGGTTT AACGAAATAA
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| Protein sequence | MRKNRLHFVL SLAAPLFSSV PLFFSPIASA ISQAELGYRD VPTIMLDGLT FKDLNRDGKV
NPYEDWRLSP DQRANDLVTR MTLAEKAGLM MHGSAPTTGS VIGAGSAYDI DTARKMIAER
SISSFITRLS GDDPTQMAEE NNKLQQIAEN TRLGIPLTIS SDPRNAFQYL VGASVSSGKF
SKWPETLGLA AIGDESLTRQ FADIVRQEYR AVGITEALSP QADLATEPRW SRSSGTFGED
AELTKKMVRG YIEGMQNGRN GLNPQSVISI VKHWVGYGAA QDGWDSHNVY GKYAIFKKND
LQQHIEPFTG AFEARVAGIM PTYSILKDAT WQGKPIEQVG AGFNRFLLTD LLRGVYGFDG
VILSDWLITN DCKDDCVTGA KPNEKPVPRG MPWGVENLTV EQRFIKAVEA GVDQFGGVTN
SSVLISAVQR GKLAESRLDV SARRLLKQKF QVGLFERPYV HAEQASQVVG KAEWQQQADK
AQRRALVLLQ NKNILPLRAG SKVWLDGIDK SVAQKAGLIV VETPELADVA VVRSVAPYEQ
PHKNFYFGAK HHEGSLAYTE NNPEYQTIVR ASTSVPTIVT VYLDRPAILT NIVDKAQAVI
ANFGISDDVL LKQLMSGEAY TGKLPFELPS SMKAVLNQQP GVPYDSKKPL FPFGFGLTK
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