Gene PC1_3294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3294 
Symbol 
ID8134267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3711978 
End bp3712712 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content48% 
IMG OID644866588 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_003018846 
Protein GI253689656 
COG category[S] Function unknown 
COG ID[COG3034] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA TCGCGCTGTC GTTTGCGATG TTGTTTTTTT TGCCTTCTCT TGTTGTTACC 
AGCGCAGCCA GCGAGACCGC ACCGCCGCTA GCGCCGATAG CAAAAGAATT AAAACAGCAA
TTATTAGGCT CTCCGATCTA TATTCAGATC TTTAAAGAAG AGCGAATATT CGAACTGTAT
GCGAAAGTCG GTAACGAATA CCGTTTATTG GATCAATACC CAATCTGTAA ATATTCGGGC
GGGTTAGGGC CAAAACGCGT TGAAGGCGAT TTAAAAAGCC CGGAAGGTTT CTATCAGGTC
GATCTGCGTC AGTTAAAACC AGACAGCCAA TATTACCGCG CAATCAATAT CGGTTTCCCC
AACGACTATG ATAAATCACA GGGATATTCC GGCCGCTATT TGATGATTCA CGGCGAATGT
GTGTCGGTTG GCTGCTATGC CATGACCAAC ACCTACATGG ATGAGATTTA TCGCTACGCT
GAAGCGGCGC TACGCAACGG TCAGCCGAAG ATTGATATCG CTATCTACCC GTTCCGCATG
ACGGAACAGA ACATGCAGCG CCACCGTAAT TCCACCTACG CCAGCTTCTG GAAACAGCTT
CAGCCGGGGT ACGCCTATTT TAATCAGCAC AATCAGCCAC CGGCCATCAC GGTATTTAAC
GGGCAATACG TCGTTAACCC ACCGTTGATG ACCAGCCAGC CGACCTTAAA GTATGCGCTC
GCCGAAACAA AATAG
 
Protein sequence
MQKIALSFAM LFFLPSLVVT SAASETAPPL APIAKELKQQ LLGSPIYIQI FKEERIFELY 
AKVGNEYRLL DQYPICKYSG GLGPKRVEGD LKSPEGFYQV DLRQLKPDSQ YYRAINIGFP
NDYDKSQGYS GRYLMIHGEC VSVGCYAMTN TYMDEIYRYA EAALRNGQPK IDIAIYPFRM
TEQNMQRHRN STYASFWKQL QPGYAYFNQH NQPPAITVFN GQYVVNPPLM TSQPTLKYAL
AETK