| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3260 |
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| Symbol | |
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| ID | 8134232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3678244 |
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| End bp | 3679932 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644866557 |
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| Product | hypothetical protein |
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| Protein accession | YP_003018816 |
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| Protein GI | 253689626 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1332] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01899] CRISPR-associated RAMP protein, Csm5 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGCG ACCAGACGCC ACTTCGCCAC ACCGCCTGTG ACAGCGACAA CATGCAATGC
TTCGCCCTCA CCTGCCTGTC GCCGGTGCAT GTCGCCACCG GCGACAGCCT GAACCCCGGT
GAATACCTGA TAGCCGACAA TGCGCTGTAT GAACTGGGGC AAGGCGGCCT GAGCCCCGCG
CTCACGGCGA CACAGCGCAG CGAGTTGCTC ACGATTCTGG AGAGCAATGC TCCTGATCTG
CCGCTGGCCG TGCAGCGCTT TCTGGCACGG GAAGCGAGCA AGCTGAAATA CGCCGCCCGC
CATGTGCGCC CGCTGTTGCC CGGCATCAGC CACTATTACC AGTCACGGCT CGGGCAGGTG
ATGCAAAAAG ATCCCAAAAA CAAAAAGCAG GTGATCAACC AGCTAGAGCT GATGCGCCAC
GTCGGTGCCG CACTGGGCGC GCCTTATATT CCCGGCTCTA CGCTCAAAGG GGCTATCCGC
ACCGCGCTGG TCAGCGCGCT CAATCAAGGC CAGCCACTGC AAGCCGAACG ATTGGAAACA
GAAAAGCTAA AAAGCACGGT GGCGCAGGAT GCGGAACGCC GGCTACTGGG CTTTGATACC
CGCCGCGACG GCCCCCCCAA ACAGCGATAC CGCGTTGAGA ATGATCCCTT TCACTGGTTA
CAGGTGGGGG ATGCCGTAAG CCCGGCAGAG CACCCGCCCA TGCTGGATTA CTGGCTGGTG
CGCCGCCAGC CGCTTAAGCG CACGGAGAAG CAGAATAACA AGGCGGACAA TATGGAACTG
TCGCCGGTTG AATGCCTCAA ACCCCGGCAA AGCCCGTTGC ACTGCCAGAT AACCGTGAAA
ACGCCGCCCG CCGCTATCCC AATAAAAAAC CCGCTCCTGA AGCAGTGGCT TGGCAAGGTG
TCGCAACTGG CGCAACAGGT GAACCAGATA ACCCTGCCGC AATGCCATCA CGAGCTGGAC
TGGCTGGCCG AAAACCACAT CGGCACGGAT GATGCGTATG CCCCCGGCCA GAACGGGGTG
GCGCAGATGC AACAATTACT GCGCCAGTTA GACGGCCCGC TACAGCGCGG CGAGGCACTC
TTGCTGCGGG TCGGCAAATA CGGCGGGGCC ATCAGCAAAA CCGTGGAGGG CTGGCGGCAT
ATCACCCGGC TCGGGAAACA AGGCACGCGC CCCACCTACC ACCCGGACGT CACCACCTGC
GCGCTGGCGC TGACGCAGGC GGATGCGCTG ACGCAGGCGC TGCCCTTTGG CTGGGTGCTG
CTGCACCGGC CTGACCAGCC GGAGGTGGCC GGGTTTGTCG CCAGCCATCA AGACTGGTGC
CAGCGGCAGC AACAATGGCT GGCAGACCAT CAGCAACAGC AGCACGCCCA CCACCAGCAA
CGCCAGCAGT TGGCTCAAGC CCGTGAAGAG GAAGCACAGC GGCTGGCAGA CAAAGCCCGC
CAGAGCAAAG CACGCCAGTC CATCATGTCT CTGGCAGAAA GCCTGGCAAG TGAGCAACAG
TTTCAGCGTA AACACCCCAA CGGCCCGCTG CGCGGTCAGT TAGCCACCTG TGTGGGTTGC
GTTGCCGCTG AAGGCTCGGC AGAAGAGAAA GCCGATCTGT GTACGCTGTT TGACACCATC
CTCAGCTATT GGGGCATCAA ACCCGGCAAA GACAAAAAAC TCACGACCTT GAGGAATAAG
CTGTTATGA
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| Protein sequence | MTRDQTPLRH TACDSDNMQC FALTCLSPVH VATGDSLNPG EYLIADNALY ELGQGGLSPA
LTATQRSELL TILESNAPDL PLAVQRFLAR EASKLKYAAR HVRPLLPGIS HYYQSRLGQV
MQKDPKNKKQ VINQLELMRH VGAALGAPYI PGSTLKGAIR TALVSALNQG QPLQAERLET
EKLKSTVAQD AERRLLGFDT RRDGPPKQRY RVENDPFHWL QVGDAVSPAE HPPMLDYWLV
RRQPLKRTEK QNNKADNMEL SPVECLKPRQ SPLHCQITVK TPPAAIPIKN PLLKQWLGKV
SQLAQQVNQI TLPQCHHELD WLAENHIGTD DAYAPGQNGV AQMQQLLRQL DGPLQRGEAL
LLRVGKYGGA ISKTVEGWRH ITRLGKQGTR PTYHPDVTTC ALALTQADAL TQALPFGWVL
LHRPDQPEVA GFVASHQDWC QRQQQWLADH QQQQHAHHQQ RQQLAQAREE EAQRLADKAR
QSKARQSIMS LAESLASEQQ FQRKHPNGPL RGQLATCVGC VAAEGSAEEK ADLCTLFDTI
LSYWGIKPGK DKKLTTLRNK LL
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