| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3256 |
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| Symbol | |
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| ID | 8134228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3673656 |
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| End bp | 3676088 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644866553 |
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| Product | CRISPR-associated protein, Csm1 family |
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| Protein accession | YP_003018812 |
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| Protein GI | 253689622 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1353] Predicted hydrolase of the HD superfamily (permuted catalytic motifs) |
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| TIGRFAM ID | [TIGR02578] CRISPR-associated protein, Csm1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTGGC TTGCCGCCTC TTGCCATGTG GCCGCCTTTG CGCTGTTACA TAACCTGAAA
TCACTGGCGC TGCATGCCGG CATTCAGGAC TTCCTGTCAC CAGCACTGGC CGAAAAATTG
TTTGCGCCGC TGCCGGAAAG CCTCTCGGCC CGTGCGGATC TGCACGAAAA TACATTAACC
CTGCTATTGG ATTTCGCCGC CAGACTGGCG CGCGGAGAGC AGGGTATTCC TACAAATAAT
GACAAAACCA ACCTAATACC ACTGACCCAC CTGTTAGTGG ACGATCCCCA CGCGGTTCCC
GCAGTGCGCT GTTACAGCCC ATTGGCTCCG CTGGGAGTCG ATTCGCTGAT GCCTGTCACA
ACATCGTTAT CTACTGGCGA ACGGCAGGCA GCATATCAGC AGGTGTATCA AACATTGATT
GACGGGCTGG ACAACATCCC CGCCGCTCAC CGCTTGCAAC CATCGTTGTG GCTTGACCAC
CTCGATAGCC TGTGGATGAC TACCTGCCAC GCGCTGCCAG ACGGCGACGG TGCCAGCGGC
ATCTCGCTGT ATGATCAGGG AAAAACCACC GCAGCCCTCG CCGTCGCGTT GTGGCAGCAC
CACGCTCGTC AAGCTAGGCC GGGGCAGGAC ATGCCACTCA CGCTAGGCGA CGATGCACGC
CTGCTGCTAA TTCAGGTCGA CGTGTTCGGC ATTCAAGAGC TGATTTTTGC CCAAGGCAAC
CAGACGCAAA AAATGGCTGC CAAACTATTG CGCGGGCGTT CGTTTCAGGT ATCCCTGCTG
GCGGAAACCG CTGCGCTGCG GGTGCAGGAA GCCTTTGACC TGCCGCCGAT ATGTCAGTTG
ATTAACGCCG CCGGCAAAAG CCTGATTGTC GCGCCGAACC TGCCGGATGC CGCCGAACGG
CTAGCTGAGT TGCGCCAATG CTTTGATGAA TGGTTTCTCA CCCACACTTA CGCGCAAACC
GGCATCGGGC TGTGCAGCAC AGTGGCGGGT AGCGCCGATT TCCTCGGCGA GCAGGCTTAT
GGCACGCTGC AAAACCGGCT GGCGCAGGCG ATGGAGCAAC AAAAATACCA GCGTTTTTCC
CTATGTGCCG GTGATGCGCC TCCGCCAGTG TTTGACGGCT ATCTGGAACA CATCGCGCAG
GGCGCAGGTG GCGAACCTTG TCCAATTAAT GGCCGACACC CCGTGGACAC CACCCTCAAC
GGGCTTGGCT GTAGCCGACT GGCGGCAGAC CAGATCACCC TCGGCCACTG GATAAGCCGC
GGTGAGCGTT ACGCTCGGCT GCTGATCCTG CGTGACGGCA CCGCCACCTT CTCTGATGAC
CGCTGCCTGC ACCTGACGCT GTTTGGCTAC CAGGTCGTGG CCGTCAGCCC GCAGGAGGCC
AGCGGCAAGT TCGGCGAACT GGCGCGCAAC GGCAGCCTGC GCCGCTGCTG GGACATCAGC
CTGCCGCCGG AAGGTATGCC CCTGTTTCAG GGCTATGCCC GCCGTTTTAT CAACGGCTGG
ATGCCGCTGG CGCTGGAGGA ATATCAGCCA GAGCGCTACC CCGGAGTTGA AGAATCACTC
GCTAACGGCG ACATCAAAAC CTTTGATCAC CTGAGCTGTG AAGATTTATA TCAGGATGCT
GACCAGCAGT TACGCGGCAC CTGCGCACTG GGCGTGCTGA AAGGCGATAT CGACAATCTT
GGTCATCTGT TTCGCAGCAG CTTGCCGCAA CCAAGCTTTG CCAAAACCAT CGGCTTGTCG
CGCCAGATAC ACCTGTTTTT CACTCTGTGG TTGCCGCATC TGTGCCGCAA AGACACGCGC
TTTGCCAATA TCTACACCGT ATTCGCTGGC GGTGACGATT TCTTTTTGAT TGGCCCGTGG
CGCAGCCAGC AGACACTAGC ACTCACAATG GCGCAGCACT TCGCGCAATA CAGCGGCCAC
AATCCGGCGC TGCATTTTTC GCTCGGACTG GTGCAGGTCA AACCCAGCTA TCCGGTGCGG
GCGCTGGCCG CTCAGGCCGA AGCCGCTCTG GAACAGGCCA AGCAACACCC CGGCAAGAAT
GCCATCTGCC TGTATAACAA GGCGATGGGC TGGCCGGAAT ATGGCGAATT ACTGGCATGT
AGCGAGGAGC TGACGCGCTG GCGCGAGCAG GAAGGCTACC CGCTCTCCTC CGGCCTGCTC
TACCGGTTAC TAGCGCTCAG TGAACTGTCA TCGAAAGAAT CAGATACCCC GCAGGCGGCA
CTGTGGCGCA GTCGGCTGGC CTATTTTTTA CGCCGCAATC TGGTGGATAA AGTGAAAGTC
CCTACGAAAG AAAACCCGGC AGCGTTCCGC CATCAGCTTT ATTTGGCCTT GTTCGCCACA
CTGGAACAGC ACCTGAAACG GCACCGCCAG CGTTACCGGG TGGCGCTTCA GCGCCATCTC
TACCACTACC GTACGGTGCC GCGCGGCGAG TAA
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| Protein sequence | MNWLAASCHV AAFALLHNLK SLALHAGIQD FLSPALAEKL FAPLPESLSA RADLHENTLT
LLLDFAARLA RGEQGIPTNN DKTNLIPLTH LLVDDPHAVP AVRCYSPLAP LGVDSLMPVT
TSLSTGERQA AYQQVYQTLI DGLDNIPAAH RLQPSLWLDH LDSLWMTTCH ALPDGDGASG
ISLYDQGKTT AALAVALWQH HARQARPGQD MPLTLGDDAR LLLIQVDVFG IQELIFAQGN
QTQKMAAKLL RGRSFQVSLL AETAALRVQE AFDLPPICQL INAAGKSLIV APNLPDAAER
LAELRQCFDE WFLTHTYAQT GIGLCSTVAG SADFLGEQAY GTLQNRLAQA MEQQKYQRFS
LCAGDAPPPV FDGYLEHIAQ GAGGEPCPIN GRHPVDTTLN GLGCSRLAAD QITLGHWISR
GERYARLLIL RDGTATFSDD RCLHLTLFGY QVVAVSPQEA SGKFGELARN GSLRRCWDIS
LPPEGMPLFQ GYARRFINGW MPLALEEYQP ERYPGVEESL ANGDIKTFDH LSCEDLYQDA
DQQLRGTCAL GVLKGDIDNL GHLFRSSLPQ PSFAKTIGLS RQIHLFFTLW LPHLCRKDTR
FANIYTVFAG GDDFFLIGPW RSQQTLALTM AQHFAQYSGH NPALHFSLGL VQVKPSYPVR
ALAAQAEAAL EQAKQHPGKN AICLYNKAMG WPEYGELLAC SEELTRWREQ EGYPLSSGLL
YRLLALSELS SKESDTPQAA LWRSRLAYFL RRNLVDKVKV PTKENPAAFR HQLYLALFAT
LEQHLKRHRQ RYRVALQRHL YHYRTVPRGE
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