| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3250 |
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| Symbol | |
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| ID | 8134222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3665838 |
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| End bp | 3667058 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866547 |
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| Product | putative FHA domain containing protein |
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| Protein accession | YP_003018806 |
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| Protein GI | 253689616 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3456] Uncharacterized conserved protein, contains FHA domain |
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| TIGRFAM ID | [TIGR03354] type VI secretion system FHA domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGTAA CCCACCCACT CACGTTGGTT GTGCTCAACA GTGAGCAGCT CGATATCAAT
TCTCAGGTAC AGCACCAGTT CGATCACCGT GGTGGCACGC TGGGCGCGTC GGAAAAAGAC
CAGTGGCAAC TGCGGGATCG GCTGGGTGCC GTGGTCCCGG CACATGCCCG TATCGACATG
ACCGATGGTT ATTTCAGCCT GTGCGATCTG AGCGGCCAGT CTTTTATTAA CGGATCGCTG
TCGCCGATTG GGCGAGATCG CAAAGTTATT TTGTCGCACG GTGATGAACT GGTGATTGGG
CCTTTCCGGC TGGGCGTGTA CATCGGCGAT CCCACCACGG AACAGGATAT CGATCAGGTA
TTAGGACAGC GCACCGACGA TGTGCTGGGC GGCTGGCTGA GTGACGATAA AAAAGGGCGG
TCTACGGATC TGGCGGATCC CTCGGTCACG TTGAATGACC CGCTGTGGGC GCTACAGAAA
GAACAGAGCC AGCCACTATT GCCATCAGAC AGTGAGACGG TCGGAGAATC GCTCACGACC
TCTCTTTCTT CTTTTTCTTC TGGTGAGGAC ACCATGGATC AGAAATTTGT GGAACTACCG
ACCATCAACA CACCGTACGC GGGAGAAGGG CTGGAGGGCT ACAACGATGG CACCTCGCTG
GCACCGCTGA TGCGCGGGCT GGGGATGTCG CTTCAGCCGG GCGATGATGC GCGATTGCGT
GAAATGCTGG AAGAGATGGG AAAAAGCCTA CGTGCGATGG TGGAAGGCCT GCTGGCATTG
CAGACGGAAC AGGCGGCAAT GGCGGATACG CATTTACGCC CGATTGAAGA TAACCCGCTG
CGTTTGGGGC TGGGCTATAC CGATACGCTG TCGGTGCTGT TTGCTGAAGG AAAAAGTCCG
GTACACCTGT CTGCGCCCGC TGCCGTGGAA GAAGTGTTGA ACAATGTGCG GGTGCATCAC
ATCGCGAATC AGCAAGCGAT TGCCGTCGCG TTGGAAAATA TTCTTCAGGC TTTCTCGCCT
GCCGCGTTGC TCAACCGCTT TGAACACTAT CGCCGCAGCG GCGAGCCACT GGCGGCGGAT
GACGGCTGGG CATGGCAGAT GTATCAGCAC TACTACCGCG AATTAACGTC GCCGCGCCAG
CAGGGCTTCC AAAAACTGTT CCATCAGGTG TATGCGCAGG CGTATGACCG CGCCGTGCGT
CAGCAGCAGG AGCAAAAATA A
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| Protein sequence | MNVTHPLTLV VLNSEQLDIN SQVQHQFDHR GGTLGASEKD QWQLRDRLGA VVPAHARIDM
TDGYFSLCDL SGQSFINGSL SPIGRDRKVI LSHGDELVIG PFRLGVYIGD PTTEQDIDQV
LGQRTDDVLG GWLSDDKKGR STDLADPSVT LNDPLWALQK EQSQPLLPSD SETVGESLTT
SLSSFSSGED TMDQKFVELP TINTPYAGEG LEGYNDGTSL APLMRGLGMS LQPGDDARLR
EMLEEMGKSL RAMVEGLLAL QTEQAAMADT HLRPIEDNPL RLGLGYTDTL SVLFAEGKSP
VHLSAPAAVE EVLNNVRVHH IANQQAIAVA LENILQAFSP AALLNRFEHY RRSGEPLAAD
DGWAWQMYQH YYRELTSPRQ QGFQKLFHQV YAQAYDRAVR QQQEQK
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