| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3220 |
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| Symbol | |
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| ID | 8134192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3629122 |
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| End bp | 3630003 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866520 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003018779 |
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| Protein GI | 253689589 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGCC TCAGCGCTCT GGAAACATTT ATCTGCGTTT TTGAAACGGG GTCGTTTTCC
GCTGCGTCCC GCAGGCTTGG TATCGGGCAG CCTGCGGTTT CCAAGGCGAT TATGCAGCTT
GAAAATCAGC TGGCAACGCC GTTGCTGCTT CGTTCTACCC GAGGGCTGAC GCCGACAGAA
GCAGGGCAGC ATTTTTATGA GCAAATTTCC CCTGCGTTAA AAATGCTGGG TGAGGCTCAG
GAGCAGGTGG TGAGCGGGAG CGCGGCGTTG TCCGGGCGGC TGCGTATCTG TGCGCCGGTA
ACCTTTGCCA GACTACACAT CATGCCTCGT CTCCATGAGT TCATGGCAGA ACATCCCCAG
CTAAACGTTG ATGTCATTCT GGACGATCGC CCAATCGATC TGATTGCTGA AGGGATTGAT
GTTGCATTGC GTTTGGGTGA AATGAAGGAT TCCAGCCTGA TCGCCCAACG GCTAGCGTCG
TGTTCCATGC GCCTGTTGGC GACACCCGAC TATTTTGCGC GTCATGGCGC GCCCGCCTCT
CCTGATGTAC TGGCTGCACA TCCTGCCGTC ATCTATTTGC AGGGGGAGAG AACCAATCGC
TGGATCTTTT CTCGGGATGG CGCACAGACC ACGGTATTCC CCAAGGGACG TATCCGTGTT
TCTGCGGCGG AAGGCGTGCG TGCGGCCGTG CTGTCCGGCG CAGGGCTGGC TGTAGCGTCT
GAATGGATGT TCGCGCCAGA ACTGGAAAGT GGGCAGGTTG TCACCGCGCT GGATTCATGG
GCGCTGGGGA AGATGGATCT GTGGGCTGTC TACCCCGGAG GCCGCATGAC ATCAGCTCGC
GCCAGAATTT TTACCGATTT CGTTCAGCGT CTTTTCTCCT AA
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| Protein sequence | MDRLSALETF ICVFETGSFS AASRRLGIGQ PAVSKAIMQL ENQLATPLLL RSTRGLTPTE
AGQHFYEQIS PALKMLGEAQ EQVVSGSAAL SGRLRICAPV TFARLHIMPR LHEFMAEHPQ
LNVDVILDDR PIDLIAEGID VALRLGEMKD SSLIAQRLAS CSMRLLATPD YFARHGAPAS
PDVLAAHPAV IYLQGERTNR WIFSRDGAQT TVFPKGRIRV SAAEGVRAAV LSGAGLAVAS
EWMFAPELES GQVVTALDSW ALGKMDLWAV YPGGRMTSAR ARIFTDFVQR LFS
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