Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3216 |
Symbol | |
ID | 8134188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3624528 |
End bp | 3625016 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644866516 |
Product | cyclase/dehydrase |
Protein accession | YP_003018775 |
Protein GI | 253689585 |
COG category | [S] Function unknown |
COG ID | [COG5637] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTCCCT CTTTCTTAAG AAAAACCGCA GCGAAAAACG GCAGCTATGC CAATGAAATC AGCAGCAGCA TTACGATCAA TCGCCCGGCA GAACGCTTGT TTGATCTTTG GCGTAAACCG GAAACGTTGC CGATCCTGAT GGGGCATTTC GCCAGTATTG AGATACTGAA CTATACCGAC TCCAACTGGC GCATTAACAC GCCGATTGGC GCGCTCATTG AATGGCAGGC GCGTATTATT GATGAAAAAC CGGGGGAATA TATCCACTGG CGTTCGCTGG AAGGAGCGCG GGTTCCCAAT GAAGGTAGGC TTTCTTTTCA ACCTGCCACA TCAGAAGTGG GTACAGTCGT GACGCTGACG ATTCGCTACA ATCCACCGGG AGGCTTGATT GGGAAAAAAA TCGGCCAAAT GTTTGATATG TTTTCCCGCG ATATGCTGAC GAAAACGCTC TATCGTTTCA AAAAATTAGC GGAGGATGAG CTGGCGTAA
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Protein sequence | MFPSFLRKTA AKNGSYANEI SSSITINRPA ERLFDLWRKP ETLPILMGHF ASIEILNYTD SNWRINTPIG ALIEWQARII DEKPGEYIHW RSLEGARVPN EGRLSFQPAT SEVGTVVTLT IRYNPPGGLI GKKIGQMFDM FSRDMLTKTL YRFKKLAEDE LA
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