Gene PC1_3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3216 
Symbol 
ID8134188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3624528 
End bp3625016 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content49% 
IMG OID644866516 
Productcyclase/dehydrase 
Protein accessionYP_003018775 
Protein GI253689585 
COG category[S] Function unknown 
COG ID[COG5637] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTCCCT CTTTCTTAAG AAAAACCGCA GCGAAAAACG GCAGCTATGC CAATGAAATC 
AGCAGCAGCA TTACGATCAA TCGCCCGGCA GAACGCTTGT TTGATCTTTG GCGTAAACCG
GAAACGTTGC CGATCCTGAT GGGGCATTTC GCCAGTATTG AGATACTGAA CTATACCGAC
TCCAACTGGC GCATTAACAC GCCGATTGGC GCGCTCATTG AATGGCAGGC GCGTATTATT
GATGAAAAAC CGGGGGAATA TATCCACTGG CGTTCGCTGG AAGGAGCGCG GGTTCCCAAT
GAAGGTAGGC TTTCTTTTCA ACCTGCCACA TCAGAAGTGG GTACAGTCGT GACGCTGACG
ATTCGCTACA ATCCACCGGG AGGCTTGATT GGGAAAAAAA TCGGCCAAAT GTTTGATATG
TTTTCCCGCG ATATGCTGAC GAAAACGCTC TATCGTTTCA AAAAATTAGC GGAGGATGAG
CTGGCGTAA
 
Protein sequence
MFPSFLRKTA AKNGSYANEI SSSITINRPA ERLFDLWRKP ETLPILMGHF ASIEILNYTD 
SNWRINTPIG ALIEWQARII DEKPGEYIHW RSLEGARVPN EGRLSFQPAT SEVGTVVTLT
IRYNPPGGLI GKKIGQMFDM FSRDMLTKTL YRFKKLAEDE LA