Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3213 |
Symbol | recA |
ID | 8134185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3621800 |
End bp | 3622873 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644866513 |
Product | recombinase A |
Protein accession | YP_003018772 |
Protein GI | 253689582 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0468] RecA/RadA recombinase |
TIGRFAM ID | [TIGR02012] protein RecA |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.996939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATTG ATGAGAACAA ACAAAAGGCA CTTGCGGCAG CACTGGGCCA AATCGAAAAG CAATTTGGTA AAGGTTCTAT CATGCGGTTG GGCGAGGATC GCTCAATGGA TGTTGAAACT ATTTCTACAG GCTCCTTGTC CCTTGATATT GCTCTGGGGG CCGGTGGTTT ACCGATGGGC CGTATCGTTG AGATTTATGG CCCGGAATCT TCCGGTAAAA CAACGCTAAC CTTACAGGTG ATTGCTGCCG CTCAGCGTGA AGGCAAAACC TGTGCGTTCA TCGATGCTGA ACATGCGTTG GATCCGATTT ATGCGAAAAA ACTTGGCGTC GATATCGATA ATCTGCTGTG TTCTCAGCCG GATACCGGCG AGCAAGCGCT GGAAATCTGT GATGCACTAA CGCGCTCCGG CGCGGTTGAC GTTATCATTG TCGACTCCGT TGCAGCTTTG ACGCCGAAAG CCGAAATTGA AGGTGAAATC GGCGACTCCC ACATGGGGCT GGCTGCACGT ATGATGAGTC AGGCTATGCG TAAACTTGCA GGTAACCTGA AACAAGCCAA TACGCTGCTG ATCTTCATCA ACCAGATCCG TATGAAAATT GGCGTGATGT TCGGTAACCC TGAAACCACC ACCGGTGGTA ACGCACTGAA GTTTTATGCT TCCGTTCGTC TGGATATTCG CCGTACTGGT GCGATTAAGG AAGGCGAAGA AGTCGTCGGC AGCGAAACTC GCGTTAAAGT CGTGAAGAAT AAAGTGGCAG CACCGTTCAA ACAGGCTGAG TTCCAGATTC TGTACGGCGA AGGTATCAAC ATCCACGGTG AGCTGGTTGA TCTGGGTGTG AAACACAAAC TGATCGAAAA AGCGGGTGCC TGGTATAGCT ATAACGGCGA CAAGATTGGT CAGGGCAAAG CAAATGCCTG TAATTTCCTG AAAGAGAACC CGGCGGTTGC TGCGGAGCTG GATAAGAAAT TGCGTGAAAT GTTGCTGCAT AAAGGCAATG AGCTGACGCC TGCCACAGCA GGCAATAGCC ATGACGAAGA TGCATTCGCC GATGAAGGTA ACGAAGAGTT TTAA
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Protein sequence | MAIDENKQKA LAAALGQIEK QFGKGSIMRL GEDRSMDVET ISTGSLSLDI ALGAGGLPMG RIVEIYGPES SGKTTLTLQV IAAAQREGKT CAFIDAEHAL DPIYAKKLGV DIDNLLCSQP DTGEQALEIC DALTRSGAVD VIIVDSVAAL TPKAEIEGEI GDSHMGLAAR MMSQAMRKLA GNLKQANTLL IFINQIRMKI GVMFGNPETT TGGNALKFYA SVRLDIRRTG AIKEGEEVVG SETRVKVVKN KVAAPFKQAE FQILYGEGIN IHGELVDLGV KHKLIEKAGA WYSYNGDKIG QGKANACNFL KENPAVAAEL DKKLREMLLH KGNELTPATA GNSHDEDAFA DEGNEEF
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