| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3205 |
|---|
| Symbol | |
|---|
| ID | 8134172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 3612427 |
|---|
| End bp | 3613221 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644866500 |
|---|
| Product | cytochrome c assembly protein |
|---|
| Protein accession | YP_003018764 |
|---|
| Protein GI | 253689574 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00378275 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTTT TCGCTATTGT GGCGCTTGTC GCCTACACAC TCAGCCTCGG ACTGATTATC
CCCAGTCTGC TGCGCAAGAA CAGTGCATAT CGTCGGCTGG CAATACTCTC GGCCAGCGCT
GCGCTAATCT GCCATGCGGT GGCGCTCTAT CAACGCATTT TCGATGTTCA GGTCGGCCAA
AACCTTAGCC TGCTGAATAT CGGTTCGCTG GTCAGTCTCA TTATCTGTAC GGTGATGACG
ATTGTCGCCT CGCGCGATCG TGGCTGGTTT ATTCTTCCTA TCGTCTACAC TTTTGCACTG
ATCAATCTGG CCTTCGCCAG CTTCATGCCA AGTGAATTTA TTACGCATCT GGAAGCGTCT
CCGGGCTTGA TGATCCATAT TGGCCTGGCA CTTTTCTCTT ATGCCACGCT GTTAATTGCC
GCTCTTTATG CACTCCAGCT CGCCTGGCTG GATTATCTGC TCAAGAATAA AAAGCTGGGA
TTTGCCGCTG ACATGCCGCC GCTAATGGGC ATTGAGCGTA AAATGTTTCA CATTACACAG
ATAGGCGTCA TTCTACTCAC GCTAACGCTC TGTACTGGCT TGTTCTACAT GGACGATCTG
ATCGATAACA AAGAAAACCT GCACAAAGCT GTGTTCTCCC TGTTTGCGTG GTTCATCTAT
ATTCTGCTGC TCTGGGGACA CTACCATGAA GGGTGGCGCG GTCGGCGCGT TGTCTGGTTC
AGCCTGCTCG GCGCGCTGAT GTTAACGCTT TCCTACTTTG GTAGCCGGGT TATACAGCAC
TTTCTCGCCG TCTGA
|
|---|
| Protein sequence | MSVFAIVALV AYTLSLGLII PSLLRKNSAY RRLAILSASA ALICHAVALY QRIFDVQVGQ
NLSLLNIGSL VSLIICTVMT IVASRDRGWF ILPIVYTFAL INLAFASFMP SEFITHLEAS
PGLMIHIGLA LFSYATLLIA ALYALQLAWL DYLLKNKKLG FAADMPPLMG IERKMFHITQ
IGVILLTLTL CTGLFYMDDL IDNKENLHKA VFSLFAWFIY ILLLWGHYHE GWRGRRVVWF
SLLGALMLTL SYFGSRVIQH FLAV
|
|---|
| |