| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3203 |
|---|
| Symbol | rpsP |
|---|
| ID | 8134170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 3610490 |
|---|
| End bp | 3610738 |
|---|
| Gene Length | 249 bp |
|---|
| Protein Length | 82 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644866498 |
|---|
| Product | 30S ribosomal protein S16 |
|---|
| Protein accession | YP_003018762 |
|---|
| Protein GI | 253689572 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0228] Ribosomal protein S16 |
|---|
| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00186632 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAACAA TTCGTTTGGC ACGTGGCGGC GCTAAAAAAC GCCCTTTCTA TCAAGTAGTC
GTGACCGACA GCCGCAATGC GCGTGATGGT CGTTTCATCG AGCGCGTAGG TTTCTTCAAC
CCAATCGCAG CTGGTCAAGC AGAAGCCCTG CGTCTGGATC TGGACCGTAT CGAGCATTGG
CTTGGTCTGG GTGCAACTGT GTCTGATCGC GTATCTTCGC TGATCAAAGA CGCTAAAAAA
GCAGCATAA
|
|---|
| Protein sequence | MVTIRLARGG AKKRPFYQVV VTDSRNARDG RFIERVGFFN PIAAGQAEAL RLDLDRIEHW
LGLGATVSDR VSSLIKDAKK AA
|
|---|
| |