Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3200 |
Symbol | rplS |
ID | 8134167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3608719 |
End bp | 3609066 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644866495 |
Product | 50S ribosomal protein L19 |
Protein accession | YP_003018759 |
Protein GI | 253689569 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0335] Ribosomal protein L19 |
TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000327928 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACA TTATTAAGCA AATCGAAGAC GAACAAATGA AGCAGGACGT ACCTGCATTT CGTCCGGGTG ATACCGTAGA AGTGAAGGTA TGGGTTGTTG AAGGTAGCAA AAAACGTCTG CAGGCATTCG AGGGCGTGGT TATCGCTATT CGTAACCGCG GTCTGCATTC TGCATTCACT GTTCGCAAAA TTTCTAACGG CGAAGGCGTG GAGCGTGTAT TCCAGACTCA CTCTCCAGTA GTTGACAGCA TCGCTGTTAA ACGTCGTGGT GCCGTGCGTA AAGCCAAACT GTACTACCTG CGTGAGCGTA CTGGTAAGTC TGCTCGTATC AAAGAGCGTC TTAACTAA
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Protein sequence | MSNIIKQIED EQMKQDVPAF RPGDTVEVKV WVVEGSKKRL QAFEGVVIAI RNRGLHSAFT VRKISNGEGV ERVFQTHSPV VDSIAVKRRG AVRKAKLYYL RERTGKSARI KERLN
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