Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3197 |
Symbol | |
ID | 8134164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3606621 |
End bp | 3607106 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644866492 |
Product | P2 GpU family protein |
Protein accession | YP_003018756 |
Protein GI | 253689566 |
COG category | [R] General function prediction only |
COG ID | [COG3499] Phage protein U |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00170121 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCTCA CATTAGGGCT GTTTGTGTTC CAGCTCCAGA CCCTGCCCTA CCAGAACATG CAGCGCAACG TTGATTACCG CTGGCCGTCA AACAGTCGCG TTGGTCAGCG TCCGGCGTTG CAGTTTTTAG GCATTGAGGA AGAGAAAATC ACGCTATCGG GGGAGTTATT GCCGGAAATC ACAGGCGGCA CGCTGTCATT GTTGATGCTG GAGACGATGG CCGATCAGGG GCGCGCATGG CCGCTGATTG AGGGCAGCGG CACCATTTAC GGCGTGTTTG TGGTGAACAG TATCAGCCAG ACGAAAACCG ACTTTTTCAC CGATGGCCGG GCCCGGCGGA TTGAGTTCAC CATCACATTA ACCCGCGTGG ACTCGTCATT GTCTGCCATG CTGGGCGATT TACGCCAGCA GGCGGAGGGC TTGATCGGCA GCGCCGGGGA AATGGCTAAC CGGGCGCAAT CCGCTGTCGG GGGTTTATTC GCATGA
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Protein sequence | MMLTLGLFVF QLQTLPYQNM QRNVDYRWPS NSRVGQRPAL QFLGIEEEKI TLSGELLPEI TGGTLSLLML ETMADQGRAW PLIEGSGTIY GVFVVNSISQ TKTDFFTDGR ARRIEFTITL TRVDSSLSAM LGDLRQQAEG LIGSAGEMAN RAQSAVGGLF A
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