| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3196 |
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| Symbol | |
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| ID | 8134163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3603740 |
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| End bp | 3606619 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644866491 |
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| Product | phage tail tape measure protein, TP901 family |
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| Protein accession | YP_003018755 |
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| Protein GI | 253689565 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5283] Phage-related tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.112717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAACA CTCTACAGTT AAGCGTTTTG CTGAAAGCCG TGGACAGGGC GACCCGCCCG
TTTAAGGCGG TGCAAACCGA AAGTAAAAAG CTGTCGGGCG ATATCCGCGA TTCACAGACC
CAGCTCAAAG ACCTGAACAC GCAGGCCGGG CGTATCGACG GTTTCCGCAA GGCAAGAAGC
CAGCTCAGCG AAACAGGCGC AGCACTCCAG CAGGCGCAGG CGAAAGCCGC CGAACTGTCG
GCAGCACTGC GCAATAGCGA AAATCCCACC AAACGGCAGG CGCAGGCGCT GGAGCGGGCG
AAACGTCAGG CCGCTACGCT AAAAACGGAG TATGGCCAAC TGCGCCAGTC GGTACAGCGC
CAGCGTACCG AGTTAGAGCA GGCAGGCATC AGCACGCGCA ACCTGTCAGG CGCGGAGCGT
AAATTACGCA CGAATATTAC TCAGACAACG ACGCAGCTTG ACCAGCAACG CGCCGCGCTT
TCCCGCGTCA GTCAGCAACA GGAAAAACTG AACGCCGTCA GACAGCGCTA TGAGAAAGGC
AAGGAAATTA CCGCCGGGGT GCGTAATACC AGTGCGGCCG CGTTTGGCCT CGGTTCCGCT
GCGCTGTATG CCGAAAGCCG CCTGATTGCA CCGTCAGTGC AGGCCGACGG ACACGGGGCG
CGCATCGCCG CACAGACAGG CGGAAATGCT GCCGACGGCG AACAGTACAC CCGCGTTATC
AAAGATATTA ACGCTTCGGG TGTGAGTAAC GATCTCACTC AGATAGCGGA CGCGGTGGCC
GCTGTACGCA GCACATTGGG GGCGATGGGG GATGTAGGCG AAACCGAGCT GGCGCGCATA
TCGCGTAAGG CGCTGGACAT ACAAACGGCG CTCGGCGGCG ATGCAACCGA GAGTATCCAG
ATAGCCGCTA TCATGATGAA AAACGGCCTG GCGAAGAACA GCGACGAGGC GTTTGACTTG
ATGGTGTCCG GGATGCAGCG CGTATCTGCA CAGATGCGCG GCGAACTGCC GGAAATCCTG
CACGAATATT CGACCCACTT CCGCAACATG GGATTCAGCG GATCGGAAGC CATGACACTA
TTAGTGGACA TGGCGCAGCA AGGCAAGTTT GCGCTGGACA AGACAGGCGA CGCGGTGAAG
GAATTCTCAA TCCGTGGGTC GGACATGTCC AAAGCCAGCA TTGAAGCCTA TGACGCTGCC
GGACTCAATG CCGCCAAAAT GTCTACCGCC ATTGCCAGCG GCGGCGATAA GGCGCGGGCG
GCAATGCAGA AAACCGCCAA CGGGCTGCTG AAAATCAAAG ACCCGGCAGA ACGGGCAAAC
GCGGCCATTG CCCTGTTTGG TACGCCGATT GAAGACCTGT CGATTGACCA GATACCGAAA
TTTCTGGCCG CGCTGGCCGG AGCCGAAAAC AAGCTGGGTG ATGTGTCCGG GGCGGCTGAC
CGCATGGGTG ATACCCTGCG CGATAACCTC GAAGGGGATA TCGGGCGGCT ACAGGGCGCG
ATGTCCAGCC TGCGCTTTAA CCTGTTCAAT GACGATGACG GCGCGCTGCG CAAACTGACG
CAGGCCGCGA CGGAATGGTT AACCCACGTC AATGAATGGG TCAAGGCTAA CCCGGAGCTG
ACGCGGCAGA TAGTCATGGT AGGCGGAGCC GCCACGGCGT TAATTACGGC GCTGGGCGGG
ATCGGGCTGG TTGCGTGGCC TGTTATGAGC GGGATTAATA CATTAGTCGG CGGAGCGGGT
TTACTGAGTG CCGGATTCGG TAAGGTCGGT GGAAAGGGAT TACCCAAGTT ATCTATGGGA
TTAAACCGCC TCGGCGGCAT GATCGGCTGG CTGGCAAAGT CGCCGCTGAT GCTGCTACGT
GCCGGAGCCT CGGCGCTGAC CTCGGTATTC GGGGCGGTCA GTAACCCGCT GACCATTATC
CGGGGCGCGA TGTCAGGGTT TGGCCGGGTG CTGATGTGGC TGTTTACCTC ACCGCTGGCA
CTGCTGCGCA CAGGCATTAC GCTGGTTGGC AGTGCGTTAG GCGTCCTGCT GTCTCCCGTC
GGGCTGGCCG TCGCGGCGAT TGTTGGCGGC GCGCTGCTTA TCTGGAAATA CTGGGAGCCC
ATCAAAGCCT TTATCGGCGG CGTGGTGGAG GGGTTTGTTG CAGCCAGTGC GCCGATTATT
GCGGCGTTTG AGCCGCTTCA GCCTGTCTTT ACGTGGATAG GCGACAAAAT AAAGGCGCTG
TTTGGCTGGT TTGGTGACCT GCTGACGCCC GTCAAATCCA CTGCCGCCGA GCTGGACAGT
GCGGCCAGTA TGGGGAAACG CTTTGGTGAG GCGCTGGCTA GCGGGCTGAA TATCATCATG
AACCCGCTGG AGTCGCTGAA AAAAGGCGTG TCGTGGCTGC TGGAAAAGCT GGGGGTGGTT
GACGATAAAT CGAAAAAGCT GCCGACGGCT GAAAATATTA TACCGCCGAA GGACGCTGCC
GCGCTTAAGG CGGGGGTCAG CACGGCCCCG GTTCCGCAAG GCAACGACGC AAAGGCAATT
GCAGCCCGAT ACAGTGGTGC GTATGACAAC GGCGGACGCA TCCCGCTGGG GAAATTTGCT
GTTGTTGGTG AACATGGCCC GGAAATCGTT GAGGGTCCGG TCAATGTCAC CAGCCGCCAG
AACACCGCCG CTATGGCGTC CGCTGCCATG AACATGTCAG CCTATCGCCC GATAGCGCCA
ACGGTGCAGG CCAGCGCGGC ATCATCCCCG GTCAGCATTC ACGCGCCCAT CAGTATTGTT
GCCCAGCCCG GCCAGAGTGC GCAGGACATC GCGCAGGAAG TCACACGCCA GCTTGAGCAG
CGGGAACGGG CGGCACGGTC ACGCGCATTC AGTCAGTACA GTTATCAGGG AGGCGAATAA
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| Protein sequence | MSNTLQLSVL LKAVDRATRP FKAVQTESKK LSGDIRDSQT QLKDLNTQAG RIDGFRKARS
QLSETGAALQ QAQAKAAELS AALRNSENPT KRQAQALERA KRQAATLKTE YGQLRQSVQR
QRTELEQAGI STRNLSGAER KLRTNITQTT TQLDQQRAAL SRVSQQQEKL NAVRQRYEKG
KEITAGVRNT SAAAFGLGSA ALYAESRLIA PSVQADGHGA RIAAQTGGNA ADGEQYTRVI
KDINASGVSN DLTQIADAVA AVRSTLGAMG DVGETELARI SRKALDIQTA LGGDATESIQ
IAAIMMKNGL AKNSDEAFDL MVSGMQRVSA QMRGELPEIL HEYSTHFRNM GFSGSEAMTL
LVDMAQQGKF ALDKTGDAVK EFSIRGSDMS KASIEAYDAA GLNAAKMSTA IASGGDKARA
AMQKTANGLL KIKDPAERAN AAIALFGTPI EDLSIDQIPK FLAALAGAEN KLGDVSGAAD
RMGDTLRDNL EGDIGRLQGA MSSLRFNLFN DDDGALRKLT QAATEWLTHV NEWVKANPEL
TRQIVMVGGA ATALITALGG IGLVAWPVMS GINTLVGGAG LLSAGFGKVG GKGLPKLSMG
LNRLGGMIGW LAKSPLMLLR AGASALTSVF GAVSNPLTII RGAMSGFGRV LMWLFTSPLA
LLRTGITLVG SALGVLLSPV GLAVAAIVGG ALLIWKYWEP IKAFIGGVVE GFVAASAPII
AAFEPLQPVF TWIGDKIKAL FGWFGDLLTP VKSTAAELDS AASMGKRFGE ALASGLNIIM
NPLESLKKGV SWLLEKLGVV DDKSKKLPTA ENIIPPKDAA ALKAGVSTAP VPQGNDAKAI
AARYSGAYDN GGRIPLGKFA VVGEHGPEIV EGPVNVTSRQ NTAAMASAAM NMSAYRPIAP
TVQASAASSP VSIHAPISIV AQPGQSAQDI AQEVTRQLEQ RERAARSRAF SQYSYQGGE
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