| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3178 |
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| Symbol | |
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| ID | 8134145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3592228 |
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| End bp | 3592737 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644866473 |
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| Product | glycoside hydrolase family 24 |
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| Protein accession | YP_003018737 |
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| Protein GI | 253689547 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.202337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATCAC TCGTTAAACG CTGCGTTATC GCAACGGTGT TAGCGCTGGC CGCGTTAGTG
CCAGATTTTT CCTTGCTGAA AACGTCACAG GAGGGGCTGG CGCTGATTGC TGACCTTGAG
GGGTGCCGCT TAAGTCCCTA TCAGTGCAGC GCGAACTTGT GGACAAACGG GATCGGACAC
ACCGCAGGCG TGGTGCCGGG GAAAACCATC ACCGAGCGTG AGGCAGCGGT CAATCTTGTG
GCCGATGTGT TACGGGTAGA AAAGGCACTG GCGCGTTGTA TGGCCGTGAA CATGCCGCAG
GCCGTCTATG ATGCCATTGT GAGCTTTGCG TTTAATGTCG GTGTCGGTGC GGCGTGTCGC
TCTACGCTGG CGTTTTTCAT CAACAAAGGC CAGTGGCGCA ACGCCTGTGA CCAGTTGCTG
CGCTGGGTGT ATGTCAACGG CGAGGTATCA CGCGGTATTG AAACCCGTCG CCAGCGTGAG
CGCGCCGTCT GTCTTAAGGG GGCAGCATGA
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| Protein sequence | MKSLVKRCVI ATVLALAALV PDFSLLKTSQ EGLALIADLE GCRLSPYQCS ANLWTNGIGH
TAGVVPGKTI TEREAAVNLV ADVLRVEKAL ARCMAVNMPQ AVYDAIVSFA FNVGVGAACR
STLAFFINKG QWRNACDQLL RWVYVNGEVS RGIETRRQRE RAVCLKGAA
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