Gene PC1_3148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3148 
Symbol 
ID8134115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3569402 
End bp3570475 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content51% 
IMG OID644866443 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_003018707 
Protein GI253689517 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAG ATTCACTTAA CAATATTAAT ATCAGTGCAG AACAGATTTT GATTACTCCC 
GATGAATTGA AAGCCAAGTT TCCGCTTAAC GATGCGGAAC AGCGTGATAT TGCGCAAGCG 
AGAGCAACCA TCGCGGATAT CATTCATGGC CGCGATGACC GACTGTTGAT TGTCTGCGGG 
CCTTGCTCGA TTCATGACAC GGATGCTGCG TTGGAGTACG CACGCCGCCT CCAGTCACTT 
GCCGCTGAAT TAAACGATCG CCTCTACATC GTGATGCGTG TTTATTTTGA AAAACCGCGT 
ACCACCGTGG GCTGGAAAGG GCTTATTAAC GATCCGTTCA TGGATGGTTC ATTTGATGTG 
GAATCAGGGT TGCACATCGC GCGCGGCCTG CTGCTGGAAC TGGTGAATAT GGGGCTGCCG 
TTGGCGACCG AAGCACTTGA TCCGAACAGC CCGCAGTACC TGGGCGATTT ATTCAGTTGG 
TCAGCTATCG GCGCACGTAC AACGGAATCA CAAACGCACC GTGAGATGGC CTCCGGCCTG 
TCCATGCCTG TTGGGTTCAA AAACGGTACG GATGGCAGCC TGGGAACGGC GATCAACGCG 
ATGAGAGCTG CCGCCATGCC ACATCGCTTT GTTGGTATCA ATCAAACCGG TCAGGTCTGT 
CTGCTGCAAA CGCAGGGGAA CATTGATGGT CACGTGATCC TGCGCGGCGG TAAAAAACCA 
AACTACAGTG CGCAGGATGT CGCTGAATGT GAAAAACAGA TGCAGGATGC GGGACTGAAA 
CCTGCGCTGA TGATAGATTG TAGTCACGGT AATTCGAATA AAGACTACCG CCGTCAGCCA 
CTTGTTGTTG AATCTGCGAT TGAACAAATT AAGGTGGGAA ATCGTTCCAT TATAGGATTG 
ATGCTGGAAA GCCACCTTAA CGAGGGGAGC CAGTCTTCAG AACAGCCGCG TTCAGATATG 
CGCTACGGTG TATCAGTCAC GGATGCCTGT ATCAGTTGGG AAAGTACAGA AGCGCTGCTG 
CGTTCCGTTC ATCAAGAGCT GAGTGCTGCA CGTGTGAAAC ATTCAGGAGA GTAA
 
Protein sequence
MQKDSLNNIN ISAEQILITP DELKAKFPLN DAEQRDIAQA RATIADIIHG RDDRLLIVCG 
PCSIHDTDAA LEYARRLQSL AAELNDRLYI VMRVYFEKPR TTVGWKGLIN DPFMDGSFDV 
ESGLHIARGL LLELVNMGLP LATEALDPNS PQYLGDLFSW SAIGARTTES QTHREMASGL 
SMPVGFKNGT DGSLGTAINA MRAAAMPHRF VGINQTGQVC LLQTQGNIDG HVILRGGKKP 
NYSAQDVAEC EKQMQDAGLK PALMIDCSHG NSNKDYRRQP LVVESAIEQI KVGNRSIIGL 
MLESHLNEGS QSSEQPRSDM RYGVSVTDAC ISWESTEALL RSVHQELSAA RVKHSGE