| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3139 |
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| Symbol | mltD |
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| ID | 8134101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3552487 |
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| End bp | 3553860 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644866429 |
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| Product | membrane-bound lytic murein transglycosylase D |
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| Protein accession | YP_003018698 |
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| Protein GI | 253689508 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.336186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCTA AAGCGATAAT CATCGCCTCA GTCTTGCTGG CGGGTTGTCA GGTTTCCCCC
CATGACACCT CGCAACCCAA ACAGCATGCA CAGAGTTTGT CTTCGGCAAG TCAAGGTGAA
GCAGGAAAGT ACACAGATGG TCGAGAGGCC TCTGCGCGAT GGCTAGATGA CGATAGCCTC
GCGCAACGAG ATCTGTGGAA CTTCATTGGC GACGAGCTGA AGATGGAGGT TCCGGATAAC
GCCCGGATCC GCGAGCAAAA AACGCGTTAT TTGAAAAATA AGAGCTATCT CCACGATGTA
ACATTACGGG CAGAGCCGTA CATGTACTGG ATAGTCGAGC AGATTAAGCA ACGTAAAATG
CCGATGGAAC TGGTACTGCT ACCCATAGTG GAGAGCGCTT TTGATCCAAG TGCCACATCA
TCCGCCAACG CCGCTGGGCT ATGGCAGATT ATCCCTGGCA CAGGACGTAA TTATGGTTTG
AAGCAGAACC AATGGTACGA CGGACGTCGC GATGTGATTG CATCCACGAC GGCAGCACTG
GATATGATGC AGCGGCTCAA CACCATGTTT GATGGCGATT GGTTATTAAC CGTTGCTGCT
TATAACAGTG GTGAAGGCCG CGTTATGCAG GCGATGAAAG CGAATAAAGC GAAAGGGAAA
TCAACCAACT TCTGGGCACT GGCGTTACCG CGTGAAACGT CAATTTATGT TCCTAAGATG
CTGGCCTTGA GCGATATTCT GAAAAACAGT AAGAAGTACG GCGTGAATCT GCCGCAACCC
AATGAAAGCC GCGCATTAGC AAAGGTTGAG TTGGGACAGC AGATAGAACT GACACAAGCC
GCTGAGATGG CTGGTCTGTC GTTGAATAAG CTAAAGAGCT ATAACTCGGG CTATAAGCGT
AATGTAACCG CACCAAATGG GCCACATTAC ATTATGGTTC CTAAAGCTCA CGTTGAGCAG
TTGAAAGATT CACTGGCTGA TGGAGACATC GCAGCGATTC AACCAACACG CTTGGCACAA
GCACAGACAA CGCCAGTATC ACAGCAGTAT AAGGTACGTT CAGGTGATAC CTTATCGGCA
ATTGCGGCAC GGCTTAATGT CAGCACAAAA GATTTGCAGA GTTGGAACAA TCTGCGTAGC
GCTGGTGCGC TCAAGGTTGG TCAGACGCTA CAAGTTGCCA AAGCTTCGGG CAGTAGCAGC
TCTATCACCT ATCAAGTTCG GAAGGGTGAT TCGCTGGCAA GCATTGCTAA ACGCCACGGC
GTAAATATCG CTGATGTGAT GCGCTGGAAT ACTGTTATCA ACAAGAATGC CAACATCCAG
CCAGGCGATC GTCTGACACT TTATGTTAGC AGCAATATAA AGCCTGATTC TTAA
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| Protein sequence | MKAKAIIIAS VLLAGCQVSP HDTSQPKQHA QSLSSASQGE AGKYTDGREA SARWLDDDSL
AQRDLWNFIG DELKMEVPDN ARIREQKTRY LKNKSYLHDV TLRAEPYMYW IVEQIKQRKM
PMELVLLPIV ESAFDPSATS SANAAGLWQI IPGTGRNYGL KQNQWYDGRR DVIASTTAAL
DMMQRLNTMF DGDWLLTVAA YNSGEGRVMQ AMKANKAKGK STNFWALALP RETSIYVPKM
LALSDILKNS KKYGVNLPQP NESRALAKVE LGQQIELTQA AEMAGLSLNK LKSYNSGYKR
NVTAPNGPHY IMVPKAHVEQ LKDSLADGDI AAIQPTRLAQ AQTTPVSQQY KVRSGDTLSA
IAARLNVSTK DLQSWNNLRS AGALKVGQTL QVAKASGSSS SITYQVRKGD SLASIAKRHG
VNIADVMRWN TVINKNANIQ PGDRLTLYVS SNIKPDS
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