Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3139 |
Symbol | mltD |
ID | 8134101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3552487 |
End bp | 3553860 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644866429 |
Product | membrane-bound lytic murein transglycosylase D |
Protein accession | YP_003018698 |
Protein GI | 253689508 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.336186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCTA AAGCGATAAT CATCGCCTCA GTCTTGCTGG CGGGTTGTCA GGTTTCCCCC CATGACACCT CGCAACCCAA ACAGCATGCA CAGAGTTTGT CTTCGGCAAG TCAAGGTGAA GCAGGAAAGT ACACAGATGG TCGAGAGGCC TCTGCGCGAT GGCTAGATGA CGATAGCCTC GCGCAACGAG ATCTGTGGAA CTTCATTGGC GACGAGCTGA AGATGGAGGT TCCGGATAAC GCCCGGATCC GCGAGCAAAA AACGCGTTAT TTGAAAAATA AGAGCTATCT CCACGATGTA ACATTACGGG CAGAGCCGTA CATGTACTGG ATAGTCGAGC AGATTAAGCA ACGTAAAATG CCGATGGAAC TGGTACTGCT ACCCATAGTG GAGAGCGCTT TTGATCCAAG TGCCACATCA TCCGCCAACG CCGCTGGGCT ATGGCAGATT ATCCCTGGCA CAGGACGTAA TTATGGTTTG AAGCAGAACC AATGGTACGA CGGACGTCGC GATGTGATTG CATCCACGAC GGCAGCACTG GATATGATGC AGCGGCTCAA CACCATGTTT GATGGCGATT GGTTATTAAC CGTTGCTGCT TATAACAGTG GTGAAGGCCG CGTTATGCAG GCGATGAAAG CGAATAAAGC GAAAGGGAAA TCAACCAACT TCTGGGCACT GGCGTTACCG CGTGAAACGT CAATTTATGT TCCTAAGATG CTGGCCTTGA GCGATATTCT GAAAAACAGT AAGAAGTACG GCGTGAATCT GCCGCAACCC AATGAAAGCC GCGCATTAGC AAAGGTTGAG TTGGGACAGC AGATAGAACT GACACAAGCC GCTGAGATGG CTGGTCTGTC GTTGAATAAG CTAAAGAGCT ATAACTCGGG CTATAAGCGT AATGTAACCG CACCAAATGG GCCACATTAC ATTATGGTTC CTAAAGCTCA CGTTGAGCAG TTGAAAGATT CACTGGCTGA TGGAGACATC GCAGCGATTC AACCAACACG CTTGGCACAA GCACAGACAA CGCCAGTATC ACAGCAGTAT AAGGTACGTT CAGGTGATAC CTTATCGGCA ATTGCGGCAC GGCTTAATGT CAGCACAAAA GATTTGCAGA GTTGGAACAA TCTGCGTAGC GCTGGTGCGC TCAAGGTTGG TCAGACGCTA CAAGTTGCCA AAGCTTCGGG CAGTAGCAGC TCTATCACCT ATCAAGTTCG GAAGGGTGAT TCGCTGGCAA GCATTGCTAA ACGCCACGGC GTAAATATCG CTGATGTGAT GCGCTGGAAT ACTGTTATCA ACAAGAATGC CAACATCCAG CCAGGCGATC GTCTGACACT TTATGTTAGC AGCAATATAA AGCCTGATTC TTAA
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Protein sequence | MKAKAIIIAS VLLAGCQVSP HDTSQPKQHA QSLSSASQGE AGKYTDGREA SARWLDDDSL AQRDLWNFIG DELKMEVPDN ARIREQKTRY LKNKSYLHDV TLRAEPYMYW IVEQIKQRKM PMELVLLPIV ESAFDPSATS SANAAGLWQI IPGTGRNYGL KQNQWYDGRR DVIASTTAAL DMMQRLNTMF DGDWLLTVAA YNSGEGRVMQ AMKANKAKGK STNFWALALP RETSIYVPKM LALSDILKNS KKYGVNLPQP NESRALAKVE LGQQIELTQA AEMAGLSLNK LKSYNSGYKR NVTAPNGPHY IMVPKAHVEQ LKDSLADGDI AAIQPTRLAQ AQTTPVSQQY KVRSGDTLSA IAARLNVSTK DLQSWNNLRS AGALKVGQTL QVAKASGSSS SITYQVRKGD SLASIAKRHG VNIADVMRWN TVINKNANIQ PGDRLTLYVS SNIKPDS
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