| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3138 |
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| Symbol | |
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| ID | 8134100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3551660 |
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| End bp | 3552415 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644866428 |
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| Product | hydroxyacylglutathione hydrolase |
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| Protein accession | YP_003018697 |
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| Protein GI | 253689507 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.319275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCTTA TCAGTATCCC CGCACTTCAG GACAACTACA TTTGGCTATT GAGCAATAAA
GAAAACCGCT GTGTGATCGT CGATCCTGGT GAAGCGTCAC CAGTGCTTGA CGCACTCGCT
CAGCACGCAC TTTTTCCTGA AGCCATCTTG CTCACTCATC ACCATAACGA CCACGTGGGG
GGGGTTCATG AACTCCTCAA ACATTACCCT AACCTGCCTG TTTTTGGCCC AAAAGAAACC
GCTAAATGTG GCGCAACCAG CCTGCTTGAG GAAGGAAATA CCGTCTCTTT ATTAAATTCG
GAATTTTCTG TAATTGAGGT TCCGGGACAC ACATCTGGTC ATATTGCCTA CTATAATGCG
CCATTTTTAT TCTGTGGCGA CACTCTGTTT TCAGCGGGAT GCGGTCGTAT CTTTGAAGGT
ACTCCTCGGC AAATGTATGA ATCAATTCAA AAAATAGCCG TACTTCCTGA CGATACGGTA
ATCTGTTGTG CACATGAATA CACGCTATCA AACTTAAGGT TTTCTAATGC GATATGGCCT
GAAGATCAAA GTATTGAAGC TTATCTTCAT GAAATCAGTC AGATACGAGA AAAATCGCAG
TCAAGTTTAC CAACAACATT AGGACTAGAG AGAAGAATCA ACCTATTTCT TCGCTGCCAT
GAACTTGATT TAAAAAGAAA ATTATCAAAA GAACCTGAAA ATATAGAGAA TTGGCAAGTT
TTTGAGATGC TACGCAGCAA GAAAGACTGC TTCTGA
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| Protein sequence | MNLISIPALQ DNYIWLLSNK ENRCVIVDPG EASPVLDALA QHALFPEAIL LTHHHNDHVG
GVHELLKHYP NLPVFGPKET AKCGATSLLE EGNTVSLLNS EFSVIEVPGH TSGHIAYYNA
PFLFCGDTLF SAGCGRIFEG TPRQMYESIQ KIAVLPDDTV ICCAHEYTLS NLRFSNAIWP
EDQSIEAYLH EISQIREKSQ SSLPTTLGLE RRINLFLRCH ELDLKRKLSK EPENIENWQV
FEMLRSKKDC F
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