Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3136 |
Symbol | rnhA |
ID | 8134098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3550420 |
End bp | 3550884 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644866426 |
Product | ribonuclease H |
Protein accession | YP_003018695 |
Protein GI | 253689505 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.46528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAAAC AGGTAGAAAT TTTCACCGAT GGATCTTGCC TCGGTAATCC CGGCCCCGGC GGTTATGGCG CCCTGCTACG CTACAAGCAG CACGAAAAAC CGTTAAGTGC AGGCTATCGT CTTACCACGA ATAACAGAAT GGAGCTGATG GCCGCTATTG CAGCGCTTGA AACGCTGACG ACCGAGTGTG ATGTGGTACT CTGCACTGAT AGCCAATATG TTCGTCAAGG GATCACCAGT TGGATTCATA ACTGGAAAAA GCGAGGTTGG AAAACCGCCG ACAAAAAACC GGTCAAAAAC GTCGATCTTT GGCAAAGGCT GGATACCGCG ATTCAACGCC ATTCCGTACG CTGGGAGTGG GTAAAAGGAC ACGCCGGGCA CCCGGAAAAT GAGCGCTGTG ATGAACTTGC TCGCGCCGCC GCCGGTGCAC CAACGCTCGA TGACACGGGT TATCAGGCTG AGTAA
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Protein sequence | MRKQVEIFTD GSCLGNPGPG GYGALLRYKQ HEKPLSAGYR LTTNNRMELM AAIAALETLT TECDVVLCTD SQYVRQGITS WIHNWKKRGW KTADKKPVKN VDLWQRLDTA IQRHSVRWEW VKGHAGHPEN ERCDELARAA AGAPTLDDTG YQAE
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