Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3135 |
Symbol | |
ID | 8134097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3549627 |
End bp | 3550364 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644866425 |
Product | DNA polymerase III subunit epsilon |
Protein accession | YP_003018694 |
Protein GI | 253689504 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.530396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACTG AAATTACGCG ACAAATCGTC CTGGATACAG AAACCACCGG TATGAATATG CTGGGGGTTC ACTACGAAGG GCATAAAATT ATCGAGATCG GTGCGGTTGA AGTGATCAAC CGCCGCCTGA CGGGCCGTCA TTTTCACGTC TATATTAAAC CCGATCGTTT AGTGGATCCC GAAGCGTATA ACGTGCACGG TATCAGCGAT GAGTTTCTTG CCGACAAACC GACGTATGCG GATATTGTGG ATGATTTCCT CGATTTTATC CGTGGCGCGG AACTGGTCAT CCATAACGCA ACGTTTGATA TCGGCTTTAT GGATTATGAA TTTCGGTTGC TGAACCGAGA TCTTCCCAAG ACAGAGACGT TTTGTAAGAT CACCGATAGC CTGCTTATGG CGCGGAAGAT CTTCCCCGGT AAGCGTAACA GTTTGGATGC GCTCTGCGAT CGCTATCAGA TAGATAACAG CAAGCGTACG CTGCACGGCG CATTGCTCGA TGCCGAGATT CTGGCTGAAG TTTATCTGGC GATGACTGGT GGTCAAACGT CTCTGACTTT CTCCATGGAA GGTGAAACGC AGCAGAAGAA CGAGAATACC GAAACGATCC AGAGAATTGT CCGCCCTCAA TCGGCGTTAA AGGTGCTTTA CGCCGATGAA GCTGAGCTAG TCGCGCATGA ACAGCGTCTG GATTTGATTG CTAAAAAAGG CGGTAGTTGC CTGTGGCGAG CGGAATAA
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Protein sequence | MSTEITRQIV LDTETTGMNM LGVHYEGHKI IEIGAVEVIN RRLTGRHFHV YIKPDRLVDP EAYNVHGISD EFLADKPTYA DIVDDFLDFI RGAELVIHNA TFDIGFMDYE FRLLNRDLPK TETFCKITDS LLMARKIFPG KRNSLDALCD RYQIDNSKRT LHGALLDAEI LAEVYLAMTG GQTSLTFSME GETQQKNENT ETIQRIVRPQ SALKVLYADE AELVAHEQRL DLIAKKGGSC LWRAE
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