Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3134 |
Symbol | nrdF |
ID | 8134095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3548291 |
End bp | 3549253 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644866423 |
Product | ribonucleotide-diphosphate reductase subunit beta |
Protein accession | YP_003018693 |
Protein GI | 253689503 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.664044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAC TCACTCGCGT CCAGGCGATT AACTGGAACA AAATTGAAGA CGACAAAGAT TTGGAAGTCT GGAATCGGCT AACCTCTAAC TTCTGGCTGC CGGAAAAGGT GCCGCTCTCT AACGATATTC CATCGTGGAG TACGCTGAAT GCCCGCGAGC GTCAGTTGAC GATTCGTGTA TTCACCGGTC TGACGCTGCT GGACACCATC CAGAATACGC TGGGCGCGCC GACGCTCATG CCTGATGCTG TGACGCCGCA TGAAGAAGCC GTGCTGTCTA ACATCAGTTT TATGGAAGCG GTGCATGCCC GTTCATACAG CTCAATTTTC TCGACGCTGT GCCTGACCAG CGAAGTGGAT GATGCCTATC GTTGGAGTGA AGAGAACCCG GCGCTACAGA AGAAATCCGA CATTATTCTG TCGCACTACC GCAGCGACGA TCCGCTGATG AAGAAAGTCG CCAGCGTGTT TCTGGAGTCG TTCCTGTTCT ACTCTGGATT CTACCTGCCG ATGTACTGGT CAAGCCGCGC CAAACTAACT AACACGGCGG ATTTAATCCG GCTGATCATC CGCGACGAAG CGGTACACGG TTACTACATT GGCTACAAAT TCCAGCGCGG ACTGGCGAAA GCCGATCCTG CTCGTCAGCA GCAGGTGAAA AATTTCGCCT ACGATCTGCT ACAGGATTTG TACGACAACG AGGTGTTATA TACGCAGGAA CTCTATGACG GCGTCGGCTG GACGGAGGAT GTGAAGAAAT TCCTCCACTA TAACGCGAAC AAAGCACTGA TGAATCTGGG CTATGAAGCG CTGTTCCCCG CCAGCATGAC GGATGTGAAT CCCGCAATTC TCTCAGCGCT ATCGCCAAAC GCTGATGAGA ACCACGATTT CTTCTCTGGC TCTGGTTCAT CTTATGTCAT CGGTAAGGCC GTCAACACCG AAGATGAAGA TTGGGACTTC TAA
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Protein sequence | MTALTRVQAI NWNKIEDDKD LEVWNRLTSN FWLPEKVPLS NDIPSWSTLN ARERQLTIRV FTGLTLLDTI QNTLGAPTLM PDAVTPHEEA VLSNISFMEA VHARSYSSIF STLCLTSEVD DAYRWSEENP ALQKKSDIIL SHYRSDDPLM KKVASVFLES FLFYSGFYLP MYWSSRAKLT NTADLIRLII RDEAVHGYYI GYKFQRGLAK ADPARQQQVK NFAYDLLQDL YDNEVLYTQE LYDGVGWTED VKKFLHYNAN KALMNLGYEA LFPASMTDVN PAILSALSPN ADENHDFFSG SGSSYVIGKA VNTEDEDWDF
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