Gene PC1_3124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3124 
Symbol 
ID8134085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3538264 
End bp3538800 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content51% 
IMG OID644866413 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_003018683 
Protein GI253689493 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAC ATACCGTGGA AGTCATGATT TCTGAGCAGG AAGTGATGGC GCGGGTTACC 
GAACTGGGGC AACAGATCAG CGAACACTAC CGTGATAGCG GCAGCGATAT GGTGCTGGTA
GGGCTATTAC GCGGATCGTT TATCTTTATG GCCGATTTAT GCCGGGCGAT CGACGTCCCT
CACGAAGTGG ATTTCATGAC GGCATCCAGT TATGGCAGCG GTATGAACAG TACGCGCGAT
GTGAAGATCC TGAAAGATCT GGATGAGGAT ATTCGCGGCA AAGATGTGTT GATCGTTGAA
GACATCATCG ACTCAGGTAA TACGCTGAGC AAAGTACGGG AAATTCTGCA ACTGCGTGAG
CCGAAATCGC TGGCTATCTG TACGCTGCTG GACAAACCAG AGCGCCGTGA AGTGGCAGTG
AAGGTCGAGT GGGTTGGATT CTCGATTCCT GATGAGTTCG TCGTGGGTTA CGGCATCGAC
TATGCTCAGC ACTATCGCCA TTTACCTTAC GTCGGCAAGG TTGTTCCGCA GGAATAA
 
Protein sequence
MMKHTVEVMI SEQEVMARVT ELGQQISEHY RDSGSDMVLV GLLRGSFIFM ADLCRAIDVP 
HEVDFMTASS YGSGMNSTRD VKILKDLDED IRGKDVLIVE DIIDSGNTLS KVREILQLRE
PKSLAICTLL DKPERREVAV KVEWVGFSIP DEFVVGYGID YAQHYRHLPY VGKVVPQE