Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3114 |
Symbol | dksA |
ID | 8134075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3529436 |
End bp | 3529891 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644866403 |
Product | RNA polymerase-binding transcription factor |
Protein accession | YP_003018673 |
Protein GI | 253689483 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1734] DnaK suppressor protein |
TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0231493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGAAG GGCAAAACCG TAAGACATCT TCTCTGAGCA TTCTCGCAAT TGCCGGAGTA GAGCCGTACC AGGAGAAGCC GGGCGAAGAG TATATGAACG ACGCTCAGCT GGCTCATTTC AAGCGTATTC TTGAAGCATG GCGCAACCAA CTCATGGATG AAGTGGATCG AACTGTATCG CACATGCGCG ATGAAGCTGC TAATTTCCCC GATCCCGTGG ATCGTGCTGC GCAGGAAGAA GAGTTCAGTC TCGAACTGCG TAACCGTGAC CGTGAGCGCA AACTGATCAA GAAAATCGCC AAAACACTGG TGAAAATCGA AGAAGAGGAT TTCGGATTCT GCGAATCCTG TGGCGTCGAG ATTGGCATCC GCCGTCTGGA AGCACGTCCG ACCGCCGATC TGTGTATCGA CTGCAAAACA TTGGCAGAGA TACGCGAAAA GCAAATGGCA GGATAA
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Protein sequence | MQEGQNRKTS SLSILAIAGV EPYQEKPGEE YMNDAQLAHF KRILEAWRNQ LMDEVDRTVS HMRDEAANFP DPVDRAAQEE EFSLELRNRD RERKLIKKIA KTLVKIEEED FGFCESCGVE IGIRRLEARP TADLCIDCKT LAEIREKQMA G
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