| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3113 |
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| Symbol | |
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| ID | 8134074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3528340 |
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| End bp | 3529044 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644866402 |
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| Product | sugar fermentation stimulation protein A |
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| Protein accession | YP_003018672 |
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| Protein GI | 253689482 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0324804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTATA CCCCACGTTT ACAACCCGCC CGATTGATTA AACGTTACAA ACGCTTTTTG
GCCGATGTCG TGACCCCGGA AGGCGAGACG CTCACGCTGC ACTGTGCCAA TACTGGCGCG
ATGACGGGCT GTGCGACGCC CGGCGATACC GTCTGGTACT CCACATCCGA TAACCCTAAA
CGTAAGTATC CGCATAGCTG GGAGCTGACA GAAACGCAAC AAAATCACTG GATTTGTGTC
AATACTCTGC GTGCCAACAC ATTATTATAC GAAGCCTTAT TGGAGAATCG CGTAGAAGAA
CTGTCGGGCT ATTCAGACGT AAAAACGGAA GTGAGATACG GTACGGAAAA TAGCCGAGTC
GACCTGCTTT TACAGGCGCC GGACAAGATT GACTGCTATA TTGAGGTGAA ATCAGTCACA
TTATTGCAAC ATGAATGTGG TTACTTTCCC GATGCAGTTA CACTCAGAGG GCAAAAGCAT
CTGCGTGAGT TGCAACAGAT GGTTTCTAAT GGAAAACGTG CGGTGCTTTT TTTCGCGGTG
CTCCATTCAG GAATCCAGCA GGTTTCTCCC GCACGGCATA TTGATTCACG CTATGCGGAA
TTATTTACAG AAGCACAACG GGCAGGGGTT GAAATTTTAT GTTACGGCTC CACATTATGC
CCTGACGGTA TTACATTGAC GCACAAGTTA CCGTTGTTGG GATGA
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| Protein sequence | MDYTPRLQPA RLIKRYKRFL ADVVTPEGET LTLHCANTGA MTGCATPGDT VWYSTSDNPK
RKYPHSWELT ETQQNHWICV NTLRANTLLY EALLENRVEE LSGYSDVKTE VRYGTENSRV
DLLLQAPDKI DCYIEVKSVT LLQHECGYFP DAVTLRGQKH LRELQQMVSN GKRAVLFFAV
LHSGIQQVSP ARHIDSRYAE LFTEAQRAGV EILCYGSTLC PDGITLTHKL PLLG
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