Gene PC1_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3106 
Symbol 
ID8134067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp3517492 
End bp3518082 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content54% 
IMG OID644866395 
Producthypothetical protein 
Protein accessionYP_003018665 
Protein GI253689475 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGACC CTTCTTTTTT CAGCTACGTC ACCGTCATGT CCATCACGCC GGGCCCCAAT 
AATCTGCTGC TGGCAACCTC AGGCGTCAAT TTTGGCCTGC GTCGTACGTT ACCGATGATG 
GTGGGAATTA CCGTTGGCTG TGGGATACAA ACGGCACTGA TGGGTGTGGC CCTGGAACTT 
CTGCTGAGCT GGATGAGCGT TATTCGCCTC CCTCTGACCG TGCTGGGGTG CGTCTATCTG 
CTATGGCTAT CGTGGAAAAT CGTGCGCTCA TCGGCACCAG AATTACAAGG GCGAGTACAG 
CCGATGACTG CACTGCAAGG AACGCTATTT CAAGCGGTGA ACCCGAAGAC CTGGCTAATG 
GCCAGCAACA TCGCACTGCT TTATACCGCC AGCGGTGGCC TTTTCACCAC GGTCATCGCC 
TTTATGGCAC TCAATCTGCC CTGCGTTTTA GTCTGGGCAG CGCTCGGCGA TCGTATCGGC 
AAACATCTTC AGGAACCGTG GAAACTGAAA GCCTTCAACG GCATTATGGC GTTCTCTCTG 
CTACTCACCA CATGCTGGAT GCTGGCTGAA GCCATCAATC TCTCACGCTA A
 
Protein sequence
MLDPSFFSYV TVMSITPGPN NLLLATSGVN FGLRRTLPMM VGITVGCGIQ TALMGVALEL 
LLSWMSVIRL PLTVLGCVYL LWLSWKIVRS SAPELQGRVQ PMTALQGTLF QAVNPKTWLM 
ASNIALLYTA SGGLFTTVIA FMALNLPCVL VWAALGDRIG KHLQEPWKLK AFNGIMAFSL 
LLTTCWMLAE AINLSR