| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3098 |
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| Symbol | |
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| ID | 8134059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3509499 |
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| End bp | 3510197 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644866387 |
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| Product | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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| Protein accession | YP_003018657 |
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| Protein GI | 253689467 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
[TIGR01705] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCG GTATTATCGG CGCGATGGAA CAAGAAGTAA CGCTGCTGCG CGATCGGATT
GAAAATCGTC AAACCTTCCA GCGTGCAGGT TGCGAAATTT ACACTGGACA AATCAACGGT
GTAGATGTCG CCCTGCTGAA ATCCGGTATC GGCAAAGTTT CCGCCGCGCT GGGCACCACG
CTGCTGCTGG AGCACAGCAA GCCAGACGTC GTAATTAACA CCGGTTCCGC AGGCGGGCTG
GCACCTAGCT TGAACGTGGG TGATATCGTC GTTTCCGATG AAGTACGCTA CCACGACGCC
GACGTCACAG CCTTTGGCTA TGAACCCGGC CAGATGGCGG GCTGCCCTGC CGCTTTCGCT
GCCGATGAAA AACTCATCGC ACTGGCACAG GAAGCGATTG CTGATTTACA GCTAAACGCC
GTACGCGGTC TGGTTGTCAG CGGTGATGCC TTCATTAACG GCGCAGAGCC ATTAGCACGC
ATCCGCACGA CCTTCCCGAA AGCAATCGCA GTGGAAATGG AAGCGACGGC GATCGCCCAT
GTCTGCCATC AGTTCGCCGT CCCGTTTGTG GTTGTGCGTG CCATTTCTGA TGTAGCCGAT
AAAGCATCAC ACCTGAGTTT CGATGAATTC CTAAGCGTTG CAGCGCAGCA ATCGACGCGG
ATGGTGGAAG CGATTCTGGC CAAGCTGGCC GCACGTTAG
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| Protein sequence | MKVGIIGAME QEVTLLRDRI ENRQTFQRAG CEIYTGQING VDVALLKSGI GKVSAALGTT
LLLEHSKPDV VINTGSAGGL APSLNVGDIV VSDEVRYHDA DVTAFGYEPG QMAGCPAAFA
ADEKLIALAQ EAIADLQLNA VRGLVVSGDA FINGAEPLAR IRTTFPKAIA VEMEATAIAH
VCHQFAVPFV VVRAISDVAD KASHLSFDEF LSVAAQQSTR MVEAILAKLA AR
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