| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3096 |
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| Symbol | |
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| ID | 8134057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3506219 |
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| End bp | 3507676 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644866385 |
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| Product | serine endoprotease |
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| Protein accession | YP_003018655 |
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| Protein GI | 253689465 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.916772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA AATCACTGGT TTTGAGTGCG CTGGCGTTAA GTCTGGCGAT GGCGATGGGT
TCTACCACGG CGAATGCGGC TGAGTCAGCG GCGTCTGCCG CGTCATCGGG TCAATTACCC
AGCCTGGCTC CTATGCTGGA AAAGGTCATG CCTTCCGTCG TAAGCATCTA CGTGGAAGGG
CATACCACGA AAGAAAACAA TGCCGGCAAA GAAGGCATTC CGCCGCAGCT TCAGCCGTTT
TTCGGTGAGA ACTCGCCTTT CTGCCAGGAC GGCTCGCCGT TCCAGTCGTC GCCGATGTGT
CAGGGAGAAG GTGACGACGA TGGCGACGGC CAGCAGCAAC CAAAACAGGA AAACTTCCAG
GCACTGGGCG CGGGCGTTGT GATTAATGCG GAAAAAGGCT ACGTGGTGAC CAACAGCCAT
GTGGTGGATA ACGCGGATAA GATTCAGGTT CGCCTCAGCG ATGGCCGCAA GTATGACGGC
AAAGTGTTAG GCAAAGACCC GCGTTCTGAT ATCGCGCTGG TGCAGTTGAA AGACTTTAAA
AATCTGACCG CGATTAAGGT CGCAGATTCC GATCAACTGC GGGTTGGTGA TTACACGGTA
GCGATTGGTA ACCCGTATGG TCTGGGCGAA ACGGCGACAT CGGGCATCGT GTCCGCGCTG
GGGCGTAGCG GGTTGAATAT TGAAAACTAC GAGAACTTTA TTCAGACCGA TGCGGCGATT
AACCGGGGGA ATTCCGGTGG CGCACTAGTG AATCTGAATG GGGAACTGGT TGGTCTGAAT
ACCGCGATTC TTGCGCCAGA TGGCGGCAAT ATCGGGATTG GTTTTGCTAT CCCCAGCAAT
ATGGTGAAAA GCGTCGTGGC ACAGATTGTC GAATTTGGCG AAGTGAAGCG CGGCGAGCTG
GGTATCACCG GGACGGAATT GAACTCCGAA CTGGCGCAGG CAATGAAGGT CGATGCTCAG
CGTGGCGCGT TTGTGAGCCA GGTGCGACCG AAGTCGGCGG CAGACGAAGC AGGCATCAAG
GCGGGGGATG TGATCGTCAC GCTGAATGGC AAAGCGGTCA GCAGCTTCTC CGCGCTGCGG
GCGCAGGTTG GCTCGTTGCC GGTGGGCAGC AAAGTGGCGT TGGGGCTGCT GCGTGAGGGT
AAACCGCTGA CGGTAGAGGT GACGCTGCAA CAGAGCAATC AGGCTCAGGT GGCTTCCGGT
AATCTCTACT CTGGCATTGA AGGTGCAGAG CTGAGCAATA CGCAGGTGGA CGGCGCAAAA
GGCGTCAAGG TGGATAACGT TAAACCGGGG TCCGCTGCGG CTAAAATTGG CCTGAAGAAG
GACGACATTA TTCTCGGTGT CAACCAGCAG GCCGTACAGA ATATTGGCGA GTTGCGCAAA
ATTCTGGATA GCAAGCCGGC AGTATTGGCC TTGAATGTAC GCCGTGGCGA CAGCACGATT
TATCTGCTGG CTCAATAA
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| Protein sequence | MKRKSLVLSA LALSLAMAMG STTANAAESA ASAASSGQLP SLAPMLEKVM PSVVSIYVEG
HTTKENNAGK EGIPPQLQPF FGENSPFCQD GSPFQSSPMC QGEGDDDGDG QQQPKQENFQ
ALGAGVVINA EKGYVVTNSH VVDNADKIQV RLSDGRKYDG KVLGKDPRSD IALVQLKDFK
NLTAIKVADS DQLRVGDYTV AIGNPYGLGE TATSGIVSAL GRSGLNIENY ENFIQTDAAI
NRGNSGGALV NLNGELVGLN TAILAPDGGN IGIGFAIPSN MVKSVVAQIV EFGEVKRGEL
GITGTELNSE LAQAMKVDAQ RGAFVSQVRP KSAADEAGIK AGDVIVTLNG KAVSSFSALR
AQVGSLPVGS KVALGLLREG KPLTVEVTLQ QSNQAQVASG NLYSGIEGAE LSNTQVDGAK
GVKVDNVKPG SAAAKIGLKK DDIILGVNQQ AVQNIGELRK ILDSKPAVLA LNVRRGDSTI
YLLAQ
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