| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3095 |
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| Symbol | |
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| ID | 8134056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3504829 |
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| End bp | 3505986 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644866384 |
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| Product | carbohydrate diacid transcriptional activator CdaR |
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| Protein accession | YP_003018654 |
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| Protein GI | 253689464 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTCGT ATCATCTCAA TGCCAAGATG GCACAGGATA TTGTCGCGCG GACCATGCAG
ATCATTGATA GCAATATCAA CGTGATGGAT GCTCGCGGTA AGATTATCGG CAGTGGCGAT
CAGGAACGAT TGGGGGAACT GCACGAAGGG GCGCTGCTGG CACTTTCGCA GGGGCGAGTC
GTTGATATTG ATGATGCCGT GGCGCGCCAC CTGCACGGCG TCCGTCCGGG GATCAATTTA
CCCTTGCGCA TCGACGGTGA AATCGTTGGT GTTATCGGTT TAACGGGTAA TCCCAGCCAG
CTGCGACAGT ACGGCGAACT GGTCTGTATG ACGGCGGAAA TGATGCTGGA ACAGGCGAGG
TTGTTGCATA TGCTGGCGCA GGATAGCCGT CTGCGTGAAG AGTTGGTGTT GAACCTGATC
CGTACTGACG ATCTTTCTCC CGCCCTCATG GAGTGGGCGC AGCGCTTAGG CATCGATCTG
AATAAGCCAC GCGTCGCGGC GGTGATCGAA GTGGACAGCG GGCAGCTCGG GGTGGATTCC
GCCATGGCGG AGCTACAGCA GTTGCAGACG CTGCTGACCA CGCCGGAACG TGACAACCTG
ATCGCGATCG TTTCCCTGAC AGAAATGGTG GTGCTAAAAC CGGCGTTGAA CAGCCACGGG
CGTTGGGATG CAGAAGATCA TCGGCGGCGG GTGGATACGC TAATGTCGCG CATGGCGGAA
AGCAGCCGGT TGCGGGTGCG GCTGGCGTTG GGGAACTATT TTGCTGGCCC CGGCAGCATC
GCGCGTTCCT ATCGCACGGC GCGCACGACC ATGAGCGTGG GCAAACAGCG TATGCCTGCT
CAGCGCTGTT ATTACTATCA GGATCTGATG TTACCCGTAC TGCTGGATAG CCTGCGCGGC
GGTTGGCAGG CAAATGAACT GGTGCGGCCA CTCTCGAAGC TTAAAGCGAT GGACGGCAAT
GGTCTGCTGC GCCGGACGCT GGGTGCCTGG TTCCGTAATA ACGTTCAGCC AGGAGCGACG
GCGAAAGCGC TATTTATTCA CCGCAATACG CTGGAGTATC GCCTCAATCG CATCTCTGAG
CTGACGGGGT TAGATCTGGG GAATTTCGAC GACCGTCTGT TGCTGTACGT GGCTTTGCAG
TTGGATGAAG AAGAGTAG
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| Protein sequence | MASYHLNAKM AQDIVARTMQ IIDSNINVMD ARGKIIGSGD QERLGELHEG ALLALSQGRV
VDIDDAVARH LHGVRPGINL PLRIDGEIVG VIGLTGNPSQ LRQYGELVCM TAEMMLEQAR
LLHMLAQDSR LREELVLNLI RTDDLSPALM EWAQRLGIDL NKPRVAAVIE VDSGQLGVDS
AMAELQQLQT LLTTPERDNL IAIVSLTEMV VLKPALNSHG RWDAEDHRRR VDTLMSRMAE
SSRLRVRLAL GNYFAGPGSI ARSYRTARTT MSVGKQRMPA QRCYYYQDLM LPVLLDSLRG
GWQANELVRP LSKLKAMDGN GLLRRTLGAW FRNNVQPGAT AKALFIHRNT LEYRLNRISE
LTGLDLGNFD DRLLLYVALQ LDEEE
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