Gene PC1_3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3094 
Symbol 
ID8134055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3503434 
End bp3504444 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content52% 
IMG OID644866383 
Productsulfate ABC transporter, periplasmic sulfate-binding protein 
Protein accessionYP_003018653 
Protein GI253689463 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1613] ABC-type sulfate transport system, periplasmic component 
TIGRFAM ID[TIGR00971] sulfate/thiosulfate-binding protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATAC GTCGTCTGGG GTTATCTGTT GCTACGGCAG CACTGTTGTT TTCCGGTGTG 
GCCTCGGCGG CTACCGAATT ATTAAACGTG TCTTACGATC CGACGCGTGA ACTGTATCAG 
CAATACAATG CGGCGTTTAT TAAGCATTGG AAAGCGACCA CCGGTGAAGA TATCACTATC 
AAAAATTCGC ACGGCGGTTC TGGAAAGCAG GCGCGTTCGG TGATTGACGG CTTGCAGGCC 
GATGTGGTGA CGCTGGCGCT GGCCGGCGAT ATTGATGCAT TAAACCTGAA TCAACAGCTG 
ATCGATCCTA AGTGGCAGGC GCGTTTGCCT GACAACAGCA CGCCTTATAC CTCCACCATC 
GTTTTTCTGG TGCGCAAAGG TAATCCAAAG CAAATCAAAG ACTGGAACGA TCTGGTGAAG 
CCGGGCGTTG AAGTCATCAC GCCAAACCCG AAAACTTCTG GCGGCGCACG TTGGAACTTC 
CTGGCTGCAT GGGCGTATGC CAAAGCGCAA CCGGGCGGTA ATGATGAAAC CGCACTGAAA 
TTTGTGACTG AACTGTATCG TCATGCGCCC GTTCTCGATA CCGGTGCGCG TGGGGCAACC 
ATTAGCTTTG TACAGCGTCA GTTAGGCGAT GTGCTGCTGG CATGGGAAAA CGAAGCGTAC 
CTGTCTCTGC AAGAGCAGGG CGGCGATCAG CTTGAGATCG TCACACCATC TCTGTCAATT 
CTGGCTGAAC CGCCGGTTGC CGTTGTGGAC AAAGTCGTTG AGCGTAAGGG AACGCAGAAA 
CAGGCTGAAG CTTATCTGCA ATACCTTTAC AGCGATGAAG CGCAGCGCAT CATCGGTAAA 
AATTTCTACC GCCCACGTAA CGCCAAGATT GCCGAAGAGT TTAAGGATCA GTTTGCACCG 
GTGAATCTGG TGACGATCGA TAAGGACTTC GGTGGCTGGA AAGCGGCACA GGATAAATTC 
TTTAACGATG GCGGCGTGTT CGACGCAATC TTTAAAGAGA TCAATAAGTA A
 
Protein sequence
MSIRRLGLSV ATAALLFSGV ASAATELLNV SYDPTRELYQ QYNAAFIKHW KATTGEDITI 
KNSHGGSGKQ ARSVIDGLQA DVVTLALAGD IDALNLNQQL IDPKWQARLP DNSTPYTSTI 
VFLVRKGNPK QIKDWNDLVK PGVEVITPNP KTSGGARWNF LAAWAYAKAQ PGGNDETALK 
FVTELYRHAP VLDTGARGAT ISFVQRQLGD VLLAWENEAY LSLQEQGGDQ LEIVTPSLSI 
LAEPPVAVVD KVVERKGTQK QAEAYLQYLY SDEAQRIIGK NFYRPRNAKI AEEFKDQFAP 
VNLVTIDKDF GGWKAAQDKF FNDGGVFDAI FKEINK