Gene PC1_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3090 
Symbol 
ID8134051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3500077 
End bp3500511 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content51% 
IMG OID644866379 
ProductDoxX family protein 
Protein accessionYP_003018649 
Protein GI253689459 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.434652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCTC AGTTGAATCA GTGGTTCACG CGTTTAACCG ATCATCCCGA TGCAGGTAAA 
CTTTTACTGC GTTTAACCGT GGGTATTCTG CTGCTGTTTC ACGGCGTAGC AAAAATTGAG
CACGGTGTGG GTTGGATTGT ACAGATGCTG CAAGGCGCAG GCCTGCCAGG TTTTATCGCT
TACGGCGTCT ACGTGGGCGA AGTCGTTGCA CCGATTCTGA TTATTCTGGG CGTATTTACC
CGTATTTCAG GCCTGATTGC CGCGCTGACG CTGGTTGTGG CAACGCTGAT GGTTGGCATG
GGTAAATTCT TCACCCTGAC CGACGTTGGC GCCTGGGCGC TGGAACTGGA AGCACTCTAT
TTCTTTGCTG GCATTATCAT CATGCTGGTT GGCAGCGGCC GTTATTCTGT TGCCTCTAAC
CCCGCTTATC GCTAA
 
Protein sequence
MISQLNQWFT RLTDHPDAGK LLLRLTVGIL LLFHGVAKIE HGVGWIVQML QGAGLPGFIA 
YGVYVGEVVA PILIILGVFT RISGLIAALT LVVATLMVGM GKFFTLTDVG AWALELEALY
FFAGIIIMLV GSGRYSVASN PAYR