Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3090 |
Symbol | |
ID | 8134051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 3500077 |
End bp | 3500511 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644866379 |
Product | DoxX family protein |
Protein accession | YP_003018649 |
Protein GI | 253689459 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.434652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTCTC AGTTGAATCA GTGGTTCACG CGTTTAACCG ATCATCCCGA TGCAGGTAAA CTTTTACTGC GTTTAACCGT GGGTATTCTG CTGCTGTTTC ACGGCGTAGC AAAAATTGAG CACGGTGTGG GTTGGATTGT ACAGATGCTG CAAGGCGCAG GCCTGCCAGG TTTTATCGCT TACGGCGTCT ACGTGGGCGA AGTCGTTGCA CCGATTCTGA TTATTCTGGG CGTATTTACC CGTATTTCAG GCCTGATTGC CGCGCTGACG CTGGTTGTGG CAACGCTGAT GGTTGGCATG GGTAAATTCT TCACCCTGAC CGACGTTGGC GCCTGGGCGC TGGAACTGGA AGCACTCTAT TTCTTTGCTG GCATTATCAT CATGCTGGTT GGCAGCGGCC GTTATTCTGT TGCCTCTAAC CCCGCTTATC GCTAA
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Protein sequence | MISQLNQWFT RLTDHPDAGK LLLRLTVGIL LLFHGVAKIE HGVGWIVQML QGAGLPGFIA YGVYVGEVVA PILIILGVFT RISGLIAALT LVVATLMVGM GKFFTLTDVG AWALELEALY FFAGIIIMLV GSGRYSVASN PAYR
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