Gene PC1_3086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3086 
Symbol 
ID8134047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3494796 
End bp3495749 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content54% 
IMG OID644866375 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003018645 
Protein GI253689455 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0131175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGTAT TTACCTGTGG TCAGTTAAGT CAGTCTGCCA GTGAACAGGG AGGGAAACTG 
CACTTCGGTC ATGAGTTACC TAGCGACCAG CCTGTGTTGG CTGGCTGGCA GCGGATTCAG
TCCTTGGGAA ATGGGCTAGT GTTGTATCTG AGCCAGAGTG AAGACCTGAT CGACGCCTTT
AGTCAGAATT TGCTGTCACC GGGTATTACT GCCGCGTTTC TGCTGCAAGG ACAAGCTGAT
GTGAGTCTGG CTGGTCAGCG TTTGCGTTTC GATGCCCATT CTGCTCGCCA GCGCGCAATG
CTGGTTAATC TGACGGATAG CGATCAGTTT CAGCGTCATT GGCAGGCTGG CCGACGGGAA
ACCAAGATCT GCCTGAGTTT CAGTCCGGCC TGGTTTGAAC GGTTCGCCAG CGAGAGTAGT
CTGTGCAGTA GCCGTTTGTT GCAATTCAGG CGCGCGCACT GGCAAAGCCT TTCCTGGCAA
CCCGCACCGG ATGTCCTGCA GCGTGCCTGC CAACTGGCTT TTGACGATCG TTCTCCGGTC
TCGCTTATCC AACGTTTGCA AGGCGAGAGT TTTGCGCTGG ATCTGGCGAC GGACATTCTA
CGAAGTATTG ATGCCACTCC CCAGCAAAAA CGTTTTGGCG CTCATCTTGA ATGCTGTCTG
GTGCGTTTGA AAGAGTGGCT GGATAGCGGC GAAGCCGATC GCCTGAGTAT CGGCCAGATG
GCTAAAACGT TAGGTACTAA TCCGGTCGAT TTGCAGAATG GTTTTCGCAC CCGTAACGGT
ATCACTATTG CTGCCTACCT ACGTAAGCAG CGGCTGGAAC GAGCCTATCA GGCACTCCAC
CGACATGTGG TGTCGGTGGA TGACGCCGCC GCGCTGGCGG GCTATGAACA TGTCAGTAGT
TTCAGCGCGG CGTTTAAAAA GCAGTATGGG TTTCCGCCTT CACAGGTCAG ATAG
 
Protein sequence
MRVFTCGQLS QSASEQGGKL HFGHELPSDQ PVLAGWQRIQ SLGNGLVLYL SQSEDLIDAF 
SQNLLSPGIT AAFLLQGQAD VSLAGQRLRF DAHSARQRAM LVNLTDSDQF QRHWQAGRRE
TKICLSFSPA WFERFASESS LCSSRLLQFR RAHWQSLSWQ PAPDVLQRAC QLAFDDRSPV
SLIQRLQGES FALDLATDIL RSIDATPQQK RFGAHLECCL VRLKEWLDSG EADRLSIGQM
AKTLGTNPVD LQNGFRTRNG ITIAAYLRKQ RLERAYQALH RHVVSVDDAA ALAGYEHVSS
FSAAFKKQYG FPPSQVR