Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3086 |
Symbol | |
ID | 8134047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3494796 |
End bp | 3495749 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644866375 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003018645 |
Protein GI | 253689455 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0131175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGTAT TTACCTGTGG TCAGTTAAGT CAGTCTGCCA GTGAACAGGG AGGGAAACTG CACTTCGGTC ATGAGTTACC TAGCGACCAG CCTGTGTTGG CTGGCTGGCA GCGGATTCAG TCCTTGGGAA ATGGGCTAGT GTTGTATCTG AGCCAGAGTG AAGACCTGAT CGACGCCTTT AGTCAGAATT TGCTGTCACC GGGTATTACT GCCGCGTTTC TGCTGCAAGG ACAAGCTGAT GTGAGTCTGG CTGGTCAGCG TTTGCGTTTC GATGCCCATT CTGCTCGCCA GCGCGCAATG CTGGTTAATC TGACGGATAG CGATCAGTTT CAGCGTCATT GGCAGGCTGG CCGACGGGAA ACCAAGATCT GCCTGAGTTT CAGTCCGGCC TGGTTTGAAC GGTTCGCCAG CGAGAGTAGT CTGTGCAGTA GCCGTTTGTT GCAATTCAGG CGCGCGCACT GGCAAAGCCT TTCCTGGCAA CCCGCACCGG ATGTCCTGCA GCGTGCCTGC CAACTGGCTT TTGACGATCG TTCTCCGGTC TCGCTTATCC AACGTTTGCA AGGCGAGAGT TTTGCGCTGG ATCTGGCGAC GGACATTCTA CGAAGTATTG ATGCCACTCC CCAGCAAAAA CGTTTTGGCG CTCATCTTGA ATGCTGTCTG GTGCGTTTGA AAGAGTGGCT GGATAGCGGC GAAGCCGATC GCCTGAGTAT CGGCCAGATG GCTAAAACGT TAGGTACTAA TCCGGTCGAT TTGCAGAATG GTTTTCGCAC CCGTAACGGT ATCACTATTG CTGCCTACCT ACGTAAGCAG CGGCTGGAAC GAGCCTATCA GGCACTCCAC CGACATGTGG TGTCGGTGGA TGACGCCGCC GCGCTGGCGG GCTATGAACA TGTCAGTAGT TTCAGCGCGG CGTTTAAAAA GCAGTATGGG TTTCCGCCTT CACAGGTCAG ATAG
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Protein sequence | MRVFTCGQLS QSASEQGGKL HFGHELPSDQ PVLAGWQRIQ SLGNGLVLYL SQSEDLIDAF SQNLLSPGIT AAFLLQGQAD VSLAGQRLRF DAHSARQRAM LVNLTDSDQF QRHWQAGRRE TKICLSFSPA WFERFASESS LCSSRLLQFR RAHWQSLSWQ PAPDVLQRAC QLAFDDRSPV SLIQRLQGES FALDLATDIL RSIDATPQQK RFGAHLECCL VRLKEWLDSG EADRLSIGQM AKTLGTNPVD LQNGFRTRNG ITIAAYLRKQ RLERAYQALH RHVVSVDDAA ALAGYEHVSS FSAAFKKQYG FPPSQVR
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