Gene PC1_3071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3071 
Symbolrnc 
ID8134026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3478173 
End bp3478853 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content51% 
IMG OID644866354 
Productribonuclease III 
Protein accessionYP_003018630 
Protein GI253689440 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0430535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCCA TCCTGATAAA TCGTTTACAA AGAAAGCTGG GCTATACTTT TCAGCAGTAC 
GAGCTTTTGT TACAGGCGTT GACGCATCGT AGCGCCAGCA GCAAACACAA TGAAAGACTC 
GAATTCCTGG GTGACTCCAT CCTGAGTTTT GTGATCGCCA ATGCGCTGTA TCATCGTTTT 
CCCAAGGTTG ATGAAGGGGA TATGAGTCGG ATGCGGGCGA CGCTGGTTCG GGGAAATACG 
CTGGCGGAAA TCGCACGTGA ATTCGAACTG GGAGAGTGCC TGCGCCTCGG CCCTGGTGAA 
TTAAAGAGCG GCGGTTTCCG TCGCGAATCG ATTCTGGCTG ATACGGTTGA AGCGCTGATC 
GGCGGCATTT TCCTCGATAG CGACATTCAG ACTATCGAAC GTTTGATCCT GAACTGGTAT 
CAAACGCGGC TGGATGAAAT CAGTCCCGGC GATAAGCAAA AAGATCCGAA AACGCGGTTG 
CAGGAGTTTC TGCAAGGGCG TCACCTACCT CTACCAACCT ATCTGGTGGT GCAGGTTCGT 
GGGGAAGCAC ACGATCAGGA GTTTACTATC CACTGTCAGG TGAGCGGCTT TAGTGAGTCG 
GTCATTGGTA CAGGATCGAG CCGTCGTAAA GCCGAACAGG CTGCGGCTGA ACAAGCGTTG 
AAAAAACTGG AGCTTGAATG A
 
Protein sequence
MNPILINRLQ RKLGYTFQQY ELLLQALTHR SASSKHNERL EFLGDSILSF VIANALYHRF 
PKVDEGDMSR MRATLVRGNT LAEIAREFEL GECLRLGPGE LKSGGFRRES ILADTVEALI 
GGIFLDSDIQ TIERLILNWY QTRLDEISPG DKQKDPKTRL QEFLQGRHLP LPTYLVVQVR 
GEAHDQEFTI HCQVSGFSES VIGTGSSRRK AEQAAAEQAL KKLELE