| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3068 |
|---|
| Symbol | |
|---|
| ID | 8134023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 3475710 |
|---|
| End bp | 3476441 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644866351 |
|---|
| Product | pyridoxine 5'-phosphate synthase |
|---|
| Protein accession | YP_003018627 |
|---|
| Protein GI | 253689437 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.867372 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAC TACTGCTTGG CGTTAACATC GATCACATTG CAACGCTGCG TAATGCGCGT
GGGACGGCGT ATCCCGATCC TGTTCAGGCG GCGTTTGTCG CTGAGCAAGC GGGAGCGGAC
GGCATCACGG TGCACTTACG TGAAGATCGC CGCCATATTA CGGATCGTGA TGTGCGGATC
CTGAGAGATA CGCTCCAAAC TCGCATGAAC CTTGAAATGG CTGTCACCGA AGAAATGCTA
AATATTGCTT GTGAGGTGAA GCCGCATTTT TGCTGTCTGG TACCGGAAAA ACGCCAGGAA
GTGACCACTG AAGGCGGGCT GGATGTCGCG GGACAGCAGG AAAAAATCAA TAACGCGGTT
GCCAGACTCA GCCAGGCTAA CATATTGGTT TCACTATTTA TTGATGCGGA TAAACGGCAA
ATTGATGCCG CCGTTGCCAG TGGTGCGCCT TATATCGAAA TTCATACCGG GGCGTATGCC
GATGCGCCAG ATGATGAAGC GCGTCAGCAT GAATTCGAGC GCATTCGTGA TGCGGCAACT
TATGCTGCGG CGCAAGGGCT GAAAGTCAAT GCCGGCCACG GTTTGACGTA CCATAACGTG
CAGCCGATTG CTGCGCTGCC GGAAATGCAC GAATTAAATA TCGGACATGC GATTATCGGA
CGTGCGGTGA TGAGCGGATT GAAGGATGCC GTTGCTGAAA TGAAGAATCT GATGCGGGAA
GCACGTCGCT GA
|
|---|
| Protein sequence | MAELLLGVNI DHIATLRNAR GTAYPDPVQA AFVAEQAGAD GITVHLREDR RHITDRDVRI
LRDTLQTRMN LEMAVTEEML NIACEVKPHF CCLVPEKRQE VTTEGGLDVA GQQEKINNAV
ARLSQANILV SLFIDADKRQ IDAAVASGAP YIEIHTGAYA DAPDDEARQH EFERIRDAAT
YAAAQGLKVN AGHGLTYHNV QPIAALPEMH ELNIGHAIIG RAVMSGLKDA VAEMKNLMRE
ARR
|
|---|
| |