Gene PC1_3057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3057 
Symbol 
ID8134012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp3448692 
End bp3449381 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content52% 
IMG OID644866340 
Producttransglutaminase family protein cysteine peptidase BTLCP 
Protein accessionYP_003018616 
Protein GI253689426 
COG category[S] Function unknown 
COG ID[COG3672] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGACTCC CCGGATTCAG ACTCTCCAGT TACAAGCTCT TCTTTATTAG CTGTCTGCTG 
TTTCTGCTGG CGGGTTCTCT GCGCGCGGAC TGGGATTTTA TTACCATCAA TCAGCGTACC 
GAGCAGCTTT ATGGCCCGGC AACGCCCGAT GCTCGCCGCC GAATAGACGA GTGGCAGACG 
CTGTTGGCCA ATTCCCGCAA TAAAGAGGAA AAGGTTCTAC TCAGTAGCGT GAACCAATTT 
TTTAATGACC GCATGCTGTT CCGCGATGAT ATTGTCGTTT GGAATCAGGA AGATTATTGG 
GCAACCCCGA TTGAGGCGCT GCGCAAAGGT GCCGGGGATT GCGAAGATTA CGCGCTCGCC 
AAGTATTTTA CGCTGCGCCA TTTAGGCGTA CCGGCGGATA AATTACGTAT TACCTATGTT 
AAAGCCCTGC GTCTGAATAA GGCGCATATG GTGGTCACCT ATTATCCAAC GCCCACCTCG 
ATTCCGCTGG TGCTGGATAA TCTGACCGAC AAGATCCAAC CCGCGACAGA GCGCACTGAT 
TTAGTTCCGG TGTACGCCTT TAATGGCGGT GGCCTCTGGC TACCCGGAGC CAGCGGCAGC 
AACAAACGCG TCGGTGACAG TAAACGACTT TCACGCTGGC AGGATGTATT AACCAAAATG 
CGTGCCGAAG GGTTTTCAAT TGAGGAGTAA
 
Protein sequence
MRLPGFRLSS YKLFFISCLL FLLAGSLRAD WDFITINQRT EQLYGPATPD ARRRIDEWQT 
LLANSRNKEE KVLLSSVNQF FNDRMLFRDD IVVWNQEDYW ATPIEALRKG AGDCEDYALA 
KYFTLRHLGV PADKLRITYV KALRLNKAHM VVTYYPTPTS IPLVLDNLTD KIQPATERTD 
LVPVYAFNGG GLWLPGASGS NKRVGDSKRL SRWQDVLTKM RAEGFSIEE