Gene PC1_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3055 
Symbol 
ID8134010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp3446831 
End bp3447469 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content55% 
IMG OID644866338 
Producthypothetical protein 
Protein accessionYP_003018614 
Protein GI253689424 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR01545] haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTGATA AGCGAGAGCA ACGCATTGTT TTTTTTGATC TGGATGGCAC GTTGCATCAG 
CAGGACATGT TTGGCAGCTT TTTGCGTTTT TTACTTCGTC GGCTGCCGCT AAATCTGGTT 
CTGGTTATCC CGCTATTGCC CGTTATCGGA CTGGGTTTAT TGATTCGCGG CCGTGCCGCG 
CGGTGGCCGA TGAGCTGGCT GCTGTGGGCG ATTACGTTTG GGCGCGATGA AGAGGAACTG 
GTTCAACTGG AAAAGCAGTT CGTCGGCGCG TTTCGTCATG ATGTTATCCC GTTTCCACAG 
GTTCAGCAGC GGCTGAAAAC CTATCTTGAA GATAGTGATG CGCAGGTGTG GCTGGTGACC 
GGATCGCCGC AGCGGTTGGT TGAACAGGTC TATCACGATT CCCCTTTTCT GCCCGGTGTT 
CGCCTGATGG GGAGCCAGAT TACACGCCGC TACGGCGGCT GGGTATTGAC GTTGCGCTGT 
CTGGGGCATG AAAAAGTCGT TCAGATGGAG CAACGTCTGG GCGCGCCGCT CAAACTCTAC 
AGCGGCTACA GCGACAGTAA ACAAGACAAC CCGCTGCTCT ATTTCTGCGA ACACCGCTGG 
CGGGTGACCC CCGACGGTAG CCTGCAACAG CTGGAATGA
 
Protein sequence
MSDKREQRIV FFDLDGTLHQ QDMFGSFLRF LLRRLPLNLV LVIPLLPVIG LGLLIRGRAA 
RWPMSWLLWA ITFGRDEEEL VQLEKQFVGA FRHDVIPFPQ VQQRLKTYLE DSDAQVWLVT 
GSPQRLVEQV YHDSPFLPGV RLMGSQITRR YGGWVLTLRC LGHEKVVQME QRLGAPLKLY 
SGYSDSKQDN PLLYFCEHRW RVTPDGSLQQ LE