Gene PC1_3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3045 
Symbol 
ID8134000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3431143 
End bp3432333 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content52% 
IMG OID644866328 
Productnitric oxide dioxygenase 
Protein accessionYP_003018604 
Protein GI253689414 
COG category[C] Energy production and conversion 
COG ID[COG1017] Hemoglobin-like flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.55248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGATA ACCAAACTAT CGCCATTGTT AAATCGACCA TTCCTCTGCT GGCGGAAACC 
GGCCCGAAAC TGACCGCACA TTTTTACGAT CGCATGTTTA CGCACAATCC TGAGCTCAAA
GATATTTTTA ATATGAGCAA CCAGCGCAAT GGCGATCAGC GGGAAGCGTT GTTCAATGCC
ATTTGTGCTT ATGCGACGAA TATCGAAAAC CTGGCCGCGC TGCTGCCTGC GGTTGAGCGT
ATCGCCCAGA AGCACGCCAG CTTTAACATT CAGGCCGATC AGTATCAGAT CGTGGGTAAT
CATTTATTGG CAACGCTGGA TGAAATGTTT AGCCCAGGAC AGGAGGTGCT GGACGCCTGG
GGTAAAGCCT ATGGCGTGCT GGCGAATGTC TTCATCCAGC GCGAAGGCGA TATCTACCGC
AGCACTGAAG CGAAAAACGG CGGCTGGAGC GGCGTGCGAC CTTTCCGCAT TGTGAACAAG
CAGCCGCAAA GTTCCATCAT TACCAGCTTC ACGCTGGAAC CCACCGACGG CCGACCTATT
GCTGATTTTC AAGCAGGTCA ATATCTGGCG GTTTACGTCA AACATGACAG TTTTGCCAAT
CAGGAGATTC GCCAATACTC TCTGACCCAC GCGCCAAATG GGAAATCCTA CCGAATTGCG
GTTAAACGTG AAGCGCAAGG CACCGTTTCC GGCTATCTGC ATGATACCGC GCGCGAAGGC
GACATCATTC ATCTGGCGGC TCCGCACGGC GATTTCTTCC TTGATATCCC CGCTTCTACA
CCCGTAGCCC TGATTTCCGG CGGCGTCGGG CAAACCCCTA TGCTGGGTAT GCTGCATACG
CTAAAACAAC AGGATCATCA GGCGAAAGTG TTATGGCTAC ACGCAGCAGA GAACGGCTCG
GCGCATGCGT TTGCGGATGA AATCAAACAA ACGGGAGAAT CGTTGCCGCA GTTCCAGCAT
CACATCTGGT ATCGCGAACC ACAGCAGGCC GATCGCTCTG GCGAAGATTA TCATCACAGC
GGATTGATGC AGTTGGCCTC GCTAAAAGAT GAATTGACCA CGCCAGATAT GCACTATTAC
CTGTGTGGCC CCGTGGTGTT CATGCAGTTT GTCGCACAGC AGTTGCTGGC GATCGGGATC
CCGGCTGAGC AGCTACATTA CGAATGTTTT GGTCCGCATA AAGTTGTCTA A
 
Protein sequence
MLDNQTIAIV KSTIPLLAET GPKLTAHFYD RMFTHNPELK DIFNMSNQRN GDQREALFNA 
ICAYATNIEN LAALLPAVER IAQKHASFNI QADQYQIVGN HLLATLDEMF SPGQEVLDAW
GKAYGVLANV FIQREGDIYR STEAKNGGWS GVRPFRIVNK QPQSSIITSF TLEPTDGRPI
ADFQAGQYLA VYVKHDSFAN QEIRQYSLTH APNGKSYRIA VKREAQGTVS GYLHDTAREG
DIIHLAAPHG DFFLDIPAST PVALISGGVG QTPMLGMLHT LKQQDHQAKV LWLHAAENGS
AHAFADEIKQ TGESLPQFQH HIWYREPQQA DRSGEDYHHS GLMQLASLKD ELTTPDMHYY
LCGPVVFMQF VAQQLLAIGI PAEQLHYECF GPHKVV