| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3033 |
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| Symbol | |
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| ID | 8133988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3417597 |
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| End bp | 3418322 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644866316 |
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| Product | RNA methyltransferase, TrmH family, group 1 |
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| Protein accession | YP_003018592 |
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| Protein GI | 253689402 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0996868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGACA ATATTCGCAT TGTTCTGGTC GAAACGTCGC ACACTGGCAA TATGGGGTCA
GTGGCCAGAG CGATGAAAAC CATGGGGTTA AGCAAGCTCT ATCTGGTCAA TCCGTTGGTT
AAGCCTGATT CACAGGCCAT TGCGTTGGCG GCAGGCGCCA GCGATGTTAT CGGTAATGCC
ACCATTGTTG ATTCGTTCGA TCAGGCGCTC GAAGGGTGTG GTCTGGTCGT TGGCACCAGC
GCACGTTCCC GAACCTTACC CTGGCCGATG TTGGAACCGC GTGAGTGCGG CGTTCGCAGC
GCGCAGGAAG CAGAGCACGC ACCGGTGGCG CTGGTGTTCG GGCGTGAACG CGTGGGATTG
ACGAATGATG AACTTCAGAA ATGCCATTAC CACGTGGCGA TTCCTGCAAA CCCGGAATAC
AGTTCGCTCA ATCTGGCGAT GGCAGTGCAG ATCATCGCTT ATGAAGTGCG TATCGCGCAT
TTGGATAGGT TACAGGCCGG ACAGCCGCAA CATGAAGAAT CGCCGTACCC GCTGGTCGAC
GATCTGGAGC GGTTTTATCA GCATCTTGAA CAGACATTAC TGCAAACCGG GTTTATCCGA
CCAGCGCATC AGGGGCAGGT CATGAACAAG CTGCGTCGCC TGTTTACCCG CGCCAGGCCT
GAAGCTCAGG AACTTAACAT CCTGCGCGGA ATACTGAGTT CGGTACAAAA AACACACGAC
GAATAA
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| Protein sequence | MLDNIRIVLV ETSHTGNMGS VARAMKTMGL SKLYLVNPLV KPDSQAIALA AGASDVIGNA
TIVDSFDQAL EGCGLVVGTS ARSRTLPWPM LEPRECGVRS AQEAEHAPVA LVFGRERVGL
TNDELQKCHY HVAIPANPEY SSLNLAMAVQ IIAYEVRIAH LDRLQAGQPQ HEESPYPLVD
DLERFYQHLE QTLLQTGFIR PAHQGQVMNK LRRLFTRARP EAQELNILRG ILSSVQKTHD
E
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