Gene PC1_3028 details

Gene Information

• Locus tag: PC1_3028
• Symbol: hscB
• ID: 8133983
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: -
• Start bp: 3414129
• End bp: 3414647
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 644866311
• Product: co-chaperone HscB
• Protein accession: YP_003018587
• Protein GI: 253689397
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1076] DnaJ-domain-containing proteins 1
• TIGRFAM ID: [TIGR00714] Fe-S protein assembly co-chaperone HscB

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTACT TTACGTTATT CGGGCTGCCG ATTCGCTATG ATGTGGATGG CGGCCTGCTT 
GCATCCCGTT TTCAGGCGTT GCAGCGGCAG TTCCATCCCG ATCGCTATGC TGCCAGCCCA 
GAGCGCGAGC GCATGCTGGC AGTGCAGCAG GCGGCGACGA TCAACAATGC CTATCAGGCG 
CTCAAGCATC CGTTGAAACG CGCGGAGTAC ATGTTGTCGC TGCACGGCTT TGATGTGAAC 
AACGAACAGC ATACGATGAA GGACACAGCA TTCCTGATGG AACAGCTGGA ACTGCGCGAA 
GAGTTGGACG CGATCTCACA GCGATCTGAT GCGGATGTGG CGTTGAGCGC GTTTGCCGGA 
CGGTTGCAGG CCATGATCGT CAAACGCTGT TCGCACATGC GTGATGAATT CGATAATGAG 
ACGTGGACAG ACGCCGCAGA TACCGTGCGC AAGCTACGCT TTTTAGACAA GCTCCAGCAA 
CAGGTTGAAG AACTCGAAGA ACAATTGCTG GACAGATAA 

 

Protein sequence

MDYFTLFGLP IRYDVDGGLL ASRFQALQRQ FHPDRYAASP ERERMLAVQQ AATINNAYQA 
LKHPLKRAEY MLSLHGFDVN NEQHTMKDTA FLMEQLELRE ELDAISQRSD ADVALSAFAG 
RLQAMIVKRC SHMRDEFDNE TWTDAADTVR KLRFLDKLQQ QVEELEEQLL DR