Gene PC1_3027 details

Gene Information

• Locus tag: PC1_3027
• Symbol: hscA
• ID: 8133982
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: -
• Start bp: 3412203
• End bp: 3414053
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 644866310
• Product: chaperone protein HscA
• Protein accession: YP_003018586
• Protein GI: 253689396
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCTTAT TACAAATTAG TGAGCCTGGT CTGAGTGCCG CACCGCACCA GCGCCGTTTG 
GCTGTCGGTA TTGATTTAGG CACCACCCAT TCTCTTGTTG CTACGGTGCG CAGCGGTGAA 
GCCCAAACGC TGGTGGATAG CGACGGACGT GACCTGTTGC CATCGGTTGT CCACTACCGT 
CGCGATGGCC ACAGCGTTGG CTGGCAGGCG CGCGACAATG CTGCTCGCGA TCCGGAAAAT 
ACCGTCAGTT CAGTCAAACG CCTGATGGGG CGCTCTCTGG ATGATATTCA ACAGCGCTAC 
CCGCATTTAC CGTATCGTTT TCATGCCAGC GATAACGGCC TGCCGCTGAT TCAGACACCT 
GCTGGTAACC TCAATCCTAT ACAAGTCTCG GCAGATATTC TGTCCGCACT GGCTGCGCGC 
GCGGAAGCGG CGTTAGGCGG TGTGCCTGAT GGCGTGGTGA TTACCGTTCC TGCGTATTTC 
GATGACGCAC AGCGTCAGGG CACCAAAGAC GCGGCACGTC TTGCTGGGCT GCATGTCTTG 
CGTCTGCTCA ATGAACCGAC CGCCGCCGCG ATTGCCTACG GGTTGGATTC CGGTAAAGAG 
GGCGTGATCG CCATTTACGA TCTGGGTGGC GGCACCTTTG ATATTTCCAT TCTGCGTCTG 
AGCCGCGGCG TTTTTGAAGT GCTGGCGACA GGCGGTGATT CTGCGCTGGG TGGTGATGAT 
TTCGATCATC TGCTAGCGGA GTGGTTGCGT GAACAGGCGG GGATTCACGA TCGTGACGAT 
CGCCAGTTGG ATCATGCGCT TCGCGCTGCG GCGGTGAAAG CCAAAATTGC GCTCAGCAGC 
GCCGAGTCAG CGAGCGTGAG TATTGCTGGC TGGCAGGGTG ATATTACCCG TGAGCAGTTT 
GATTCGCTGA TCGCTCCACT GGTGAAACGC ACGCTGCTGT CCTGCCGTCG TACGCTGAAA 
GACGCAGGAC TGACGCCGGA AGAGGTGCTG GAAGTGGTGA TGGTGGGCGG ATCGACACGT 
GTTCCGCTGG TGCGCGAACA GGTGGGAACG TTTTTTGGTC GCACGCCGCT GACGTCGATC 
GATCCAGATA AGGTCGTGGC GATGGGGGCG GCGATCCAGG CGGATATTCT GGTGGGCAAC 
AAGCCAGACA GCGACATGCT ACTGCTTGAT GTCATCCCCT TGTCCTTGGG GCTGGAGACG 
ATGGGCGGAT TGGTGGAAAA AATCATTCCG CGCAATACCA CGATCCCGGT TGCCCGCGCA 
CAGGAATTCA CCACCTTCAA AGACGGCCAG AGCGGCATGA TGATCCACGT CTTGCAGGGC 
GAACGCGAAA TGGTGGCGGA TTGCCGTTCG CTTGCTCGCT TCTCGTTGCG CGGCTTGCCG 
CCGCTGCCTG CTGGTGGGGC GCATATTCGC GTGACCTTTC AGGTTGATGC GGATGGTCTG 
CTGAGCGTGA CGGCGATGGA GAAATCGACG GGCGTTGAGG CGTCAATTCA GGTGAAGCCG 
TCATACGGCT TGAGCGATAC GGAAATTGCC ACCATGATCA CCGACTCAAT GCTGAATGCG 
AAGGAAGATG TCGGCGCGCG TCGTCTGGCA GAGCAAAAAG TGGAGGCGGC ACGCGTGCTG 
GAAAGTTTGC AAAGCGCGTT GGTGGCTGAC GCCGAGTTAT TGAGCAATGA CGAAAAAGGC 
GTCATTGTCG CGGCATCCGA ACACCTGCAT ACGATGATGC AGGGCAGCGA TCCCGTGGCG 
ATTGAAGCCG CGATTAAAAC AGTCGATCAA CAAACCCAGG AATTCGCCGC TCGCCGTATG 
GATGCTTCTA TCCGTCGCGC GTTGGCAGGC CATTCTGTGG ATGAGGTGTA A 

 

Protein sequence

MALLQISEPG LSAAPHQRRL AVGIDLGTTH SLVATVRSGE AQTLVDSDGR DLLPSVVHYR 
RDGHSVGWQA RDNAARDPEN TVSSVKRLMG RSLDDIQQRY PHLPYRFHAS DNGLPLIQTP 
AGNLNPIQVS ADILSALAAR AEAALGGVPD GVVITVPAYF DDAQRQGTKD AARLAGLHVL 
RLLNEPTAAA IAYGLDSGKE GVIAIYDLGG GTFDISILRL SRGVFEVLAT GGDSALGGDD 
FDHLLAEWLR EQAGIHDRDD RQLDHALRAA AVKAKIALSS AESASVSIAG WQGDITREQF 
DSLIAPLVKR TLLSCRRTLK DAGLTPEEVL EVVMVGGSTR VPLVREQVGT FFGRTPLTSI 
DPDKVVAMGA AIQADILVGN KPDSDMLLLD VIPLSLGLET MGGLVEKIIP RNTTIPVARA 
QEFTTFKDGQ SGMMIHVLQG EREMVADCRS LARFSLRGLP PLPAGGAHIR VTFQVDADGL 
LSVTAMEKST GVEASIQVKP SYGLSDTEIA TMITDSMLNA KEDVGARRLA EQKVEAARVL 
ESLQSALVAD AELLSNDEKG VIVAASEHLH TMMQGSDPVA IEAAIKTVDQ QTQEFAARRM 
DASIRRALAG HSVDEV