Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_3024 |
Symbol | |
ID | 8133979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 3410181 |
End bp | 3411491 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644866307 |
Product | aminopeptidase B |
Protein accession | YP_003018583 |
Protein GI | 253689393 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0260] Leucyl aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAACA ATACCATGCT GATTTCACTC TCCACGCAAC CTGCTGATGC GCGCTGGGGA GAAAAAGCGA CGCTGAGTGT GAATGAGCAG GGTTTTACCA TTCATGTTGG AACGACGTCA CTGAATGGCA AAGCCGCGCT GGCGACGATC CAGCGTGCCG CCCGTAAAAT CGACGGGCAG GGGATTAAAC ACGTTAAATT AGCCGGTGAA GGCTGGGATC TGGCAAACAG CTGGGCATTT TGGCAAGGGT ATCGCGGGCC GAAAGGGCAA AGAACGGTTG AATGGGCGGA TCTGAGCGAC GCCGATAAGA AAGAACTGAA TGATCGTCTG AAGATTGTTG ACTGGGTGCG TGACACTATC AACCTGCCTG CTGAAGATTT GGGGCCAGAA CAACTGGCAA CCCGCGCAGT CGATTTATTG TGTGATGTTG CCTGTGATGC CATCAGCTAC CGTATCACCA AAGGTGAAGA TCTGCGTGAG CAGAATTACG CCGGTCTGCA CACGGTCGGT CGCGGTTCTG AACGTCAGCC GGTGCTACTG GCACTGGACT ATAACCCAAC GGGTAACGCG GATGCGCCGG TGTTCGCCTG TCTGGTGGGC AAAGGTATTA CGTTTGATAC CGGTGGCTAC AGCCTGAAGC CTAGCAGTTC TATGGACTCC ATGAAATCGG ATATGGGCGG TGCAGCTACT CTGACTGGCG CACTGGCGCT GGCGGCGTCA CGCGGTTTGC AACAGCGTGT GAAGTTGTAT CTGTGCTGTG CAGATAACAT GGTGAGCGGC AATGCGTTCC GACTGGGTGA TATCATTCGC TACCGCAACG GCAAGACGGT TGAAGTCATG AACACGGATG CGGAAGGGCG TCTGGTGCTG GCGGATGGCC TGATTGATGC TTCCGAGCAG AATCCGCAGT GGATTATCGA CTGCGCAACG CTGACGGGCG CAGCGAAAAT GGCGCTGGGT AACGATTATC ACGCACTGTT CAGCTTTGAT GATGAGTTGG TTGCGGCATT GCAGGAAAGT GCGAAAGAAG AGAACGAACC GTTCTGGCGC CTGCCACTGG AAGAATTCCA CCGTAGCCAT CTGCCGTCCA GCTTTGCGGA TCTGAACAAT ATTGCCAGTG GTGCAAACAC CGCCGGCGCC AGCACGGCGG CGGCTTTCCT GTCGCACTTT GTGAAGAATT ACCAGCAAGG CTGGCTGCAC ATCGACTGTT CCGCAACATA CCGCAAAAGT GCGGTAGAGC AGTGGGCGAC AGGCGCTACG GGGCTCGGTG TTCGCACTCT GGCGAATCTC TTGCTGAGCA ACGCCAAGTA G
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Protein sequence | MTNNTMLISL STQPADARWG EKATLSVNEQ GFTIHVGTTS LNGKAALATI QRAARKIDGQ GIKHVKLAGE GWDLANSWAF WQGYRGPKGQ RTVEWADLSD ADKKELNDRL KIVDWVRDTI NLPAEDLGPE QLATRAVDLL CDVACDAISY RITKGEDLRE QNYAGLHTVG RGSERQPVLL ALDYNPTGNA DAPVFACLVG KGITFDTGGY SLKPSSSMDS MKSDMGGAAT LTGALALAAS RGLQQRVKLY LCCADNMVSG NAFRLGDIIR YRNGKTVEVM NTDAEGRLVL ADGLIDASEQ NPQWIIDCAT LTGAAKMALG NDYHALFSFD DELVAALQES AKEENEPFWR LPLEEFHRSH LPSSFADLNN IASGANTAGA STAAAFLSHF VKNYQQGWLH IDCSATYRKS AVEQWATGAT GLGVRTLANL LLSNAK
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