Gene PC1_3024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_3024 
Symbol 
ID8133979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp3410181 
End bp3411491 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content55% 
IMG OID644866307 
Productaminopeptidase B 
Protein accessionYP_003018583 
Protein GI253689393 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0260] Leucyl aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAACA ATACCATGCT GATTTCACTC TCCACGCAAC CTGCTGATGC GCGCTGGGGA 
GAAAAAGCGA CGCTGAGTGT GAATGAGCAG GGTTTTACCA TTCATGTTGG AACGACGTCA
CTGAATGGCA AAGCCGCGCT GGCGACGATC CAGCGTGCCG CCCGTAAAAT CGACGGGCAG
GGGATTAAAC ACGTTAAATT AGCCGGTGAA GGCTGGGATC TGGCAAACAG CTGGGCATTT
TGGCAAGGGT ATCGCGGGCC GAAAGGGCAA AGAACGGTTG AATGGGCGGA TCTGAGCGAC
GCCGATAAGA AAGAACTGAA TGATCGTCTG AAGATTGTTG ACTGGGTGCG TGACACTATC
AACCTGCCTG CTGAAGATTT GGGGCCAGAA CAACTGGCAA CCCGCGCAGT CGATTTATTG
TGTGATGTTG CCTGTGATGC CATCAGCTAC CGTATCACCA AAGGTGAAGA TCTGCGTGAG
CAGAATTACG CCGGTCTGCA CACGGTCGGT CGCGGTTCTG AACGTCAGCC GGTGCTACTG
GCACTGGACT ATAACCCAAC GGGTAACGCG GATGCGCCGG TGTTCGCCTG TCTGGTGGGC
AAAGGTATTA CGTTTGATAC CGGTGGCTAC AGCCTGAAGC CTAGCAGTTC TATGGACTCC
ATGAAATCGG ATATGGGCGG TGCAGCTACT CTGACTGGCG CACTGGCGCT GGCGGCGTCA
CGCGGTTTGC AACAGCGTGT GAAGTTGTAT CTGTGCTGTG CAGATAACAT GGTGAGCGGC
AATGCGTTCC GACTGGGTGA TATCATTCGC TACCGCAACG GCAAGACGGT TGAAGTCATG
AACACGGATG CGGAAGGGCG TCTGGTGCTG GCGGATGGCC TGATTGATGC TTCCGAGCAG
AATCCGCAGT GGATTATCGA CTGCGCAACG CTGACGGGCG CAGCGAAAAT GGCGCTGGGT
AACGATTATC ACGCACTGTT CAGCTTTGAT GATGAGTTGG TTGCGGCATT GCAGGAAAGT
GCGAAAGAAG AGAACGAACC GTTCTGGCGC CTGCCACTGG AAGAATTCCA CCGTAGCCAT
CTGCCGTCCA GCTTTGCGGA TCTGAACAAT ATTGCCAGTG GTGCAAACAC CGCCGGCGCC
AGCACGGCGG CGGCTTTCCT GTCGCACTTT GTGAAGAATT ACCAGCAAGG CTGGCTGCAC
ATCGACTGTT CCGCAACATA CCGCAAAAGT GCGGTAGAGC AGTGGGCGAC AGGCGCTACG
GGGCTCGGTG TTCGCACTCT GGCGAATCTC TTGCTGAGCA ACGCCAAGTA G
 
Protein sequence
MTNNTMLISL STQPADARWG EKATLSVNEQ GFTIHVGTTS LNGKAALATI QRAARKIDGQ 
GIKHVKLAGE GWDLANSWAF WQGYRGPKGQ RTVEWADLSD ADKKELNDRL KIVDWVRDTI
NLPAEDLGPE QLATRAVDLL CDVACDAISY RITKGEDLRE QNYAGLHTVG RGSERQPVLL
ALDYNPTGNA DAPVFACLVG KGITFDTGGY SLKPSSSMDS MKSDMGGAAT LTGALALAAS
RGLQQRVKLY LCCADNMVSG NAFRLGDIIR YRNGKTVEVM NTDAEGRLVL ADGLIDASEQ
NPQWIIDCAT LTGAAKMALG NDYHALFSFD DELVAALQES AKEENEPFWR LPLEEFHRSH
LPSSFADLNN IASGANTAGA STAAAFLSHF VKNYQQGWLH IDCSATYRKS AVEQWATGAT
GLGVRTLANL LLSNAK