| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_3022 |
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| Symbol | |
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| ID | 8133977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 3408512 |
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| End bp | 3409300 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644866305 |
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| Product | transcriptional regulator, RpiR family |
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| Protein accession | YP_003018581 |
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| Protein GI | 253689391 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGATAATC GGCTGGCGTC CTTAATGCAG CACGGTCAGG TGCTGACCCG CGCGGAATAC
CGCGTGCTGG CTTTTATCGC CGAACATTCG TCGCTGATCG GCAAAATCAC GGTGCGTGAG
CTGGCACAGA AGACCTATGT TTCCACCGCA ACCATCATGC GGCTGTGCCA GAAAATCGGC
TTTAGCGGCT ACAGTGAATT CATTTATCAC TGCAAAACGC TGCTCACGGA TAATCCGCGA
CTTTCCCCCT CGCCCGTCGT CACGCCCGAT GACGCTTCAC TTCCCGATGC TTTCCAGCAT
TTTGTCGACA ACTACCAGCG CACGTTTGCC TACATTAGCC ATCAGGATAG AGCGACTTTC
AGCGCTATCC TGCGACAGGA AAGCCACTTT TTCCTCTACG GTGCGGGGTT TTCTCACCTG
TTTGCCGAAT ATTTGGCGAA GAAGCTACAG GTGCTGGGGA AAGATGCATT CTCTTCCGGG
CTAGGAGATA GCCGGGGCAT TTTTCTTAAT AACGCGCCAA AATATCAGGT GTTTATCGCC
ATTTCCCGCA GTGGGGAAAC CGAGCAGGTG TTGGATAAGG CGCGTATCGC CAAAAACATT
GGCATGAAAG TGATCGCGTT TACCCGAGCG TCATTGAATT CATTAGGCGA GTTGGCCGAT
TTGCACTTCC GGCTCTACGA TGATGCGGTT CACTATGCGG CGGAAGCCGG CGAGATTAGC
TCATTTGAAT CGAATCTGGT GATGTTGATC GATTTACTGC TGTTGCAGGC AACAGCGGAA
AAATCGTAA
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| Protein sequence | MDNRLASLMQ HGQVLTRAEY RVLAFIAEHS SLIGKITVRE LAQKTYVSTA TIMRLCQKIG
FSGYSEFIYH CKTLLTDNPR LSPSPVVTPD DASLPDAFQH FVDNYQRTFA YISHQDRATF
SAILRQESHF FLYGAGFSHL FAEYLAKKLQ VLGKDAFSSG LGDSRGIFLN NAPKYQVFIA
ISRSGETEQV LDKARIAKNI GMKVIAFTRA SLNSLGELAD LHFRLYDDAV HYAAEAGEIS
SFESNLVMLI DLLLLQATAE KS
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